RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 APOBEC3DQ96AK3 386 aaPredicted RBP11.04□□□□□ -0.64
MSH2-201ENST00000233146 HCFC1R1Q9NWW0 138 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 PRRC2BQ5JSZ5 2229 aaKnown RBP11.04□□□□□ -0.64
MSH2-201ENST00000233146 BLACEA4D250 179 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 LIPT2A6NK58 231 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 K7EP34 96 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 SLC17A3O00476 420 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 DUSP11O75319 330 aaKnown RBP11.04□□□□□ -0.64
MSH2-201ENST00000233146 ARF3P61204 181 aaPredicted RBP11.04□□□□□ -0.64
MSH2-201ENST00000233146 ARF1P84077 181 aaKnown RBP11.04□□□□□ -0.64
MSH2-201ENST00000233146 TCTEX1D4Q5JR98 221 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 NPFFR1Q9GZQ6 430 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 IL36GQ9NZH8 169 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 THYN1Q9P016 225 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 ADAMTS9Q9P2N4 1935 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 TDRD6O60522 2096 aaKnown RBP11.04□□□□□ -0.64
MSH2-201ENST00000233146 A0A0G2JRQ6 117 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 FCGR2AP12318 317 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 ZNF121P58317 390 aaPredicted RBP11.04□□□□□ -0.64
MSH2-201ENST00000233146 PLP1P60201 277 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 HSD52Q0P140 79 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 MYBPHQ13203 477 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 OR2Z1Q8NG97 314 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 PSENENQ9NZ42 101 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 PRUNE2Q8WUY3 3088 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 A0A1W2PR80 420 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 WISP1O95388 367 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 SSTR5P35346 364 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 TMEM136Q6ZRR5 245 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 MRPL21Q7Z2W9 205 aaKnown RBP11.03□□□□□ -0.64
MSH2-201ENST00000233146 SPATA12Q7Z6I5 190 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 CA13Q8N1Q1 262 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 KCNIP2Q9NS61 270 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 HLA-DRB1P01911 266 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 SRIP30626 198 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 ATP5G3P48201 142 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 ZNF157P51786 506 aaPredicted RBP11.03□□□□□ -0.64
MSH2-201ENST00000233146 UBE2G1P62253 170 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 PSG7Q13046 419 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 OR5D13Q8NGL4 314 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 OR4A5Q8NH83 315 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 KCNK17Q96T54 332 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 GPHA2Q96T91 129 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 ULBP2Q9BZM5 246 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 USP34Q70CQ2 3546 aa11.03□□□□□ -0.64
MSH2-201ENST00000233146 SRFP11831 508 aa11.02□□□□□ -0.64
MSH2-201ENST00000233146 SLC25A6P12236 298 aa11.02□□□□□ -0.64
MSH2-201ENST00000233146 ZNF776Q68DI1 518 aaPredicted RBP11.02□□□□□ -0.64
MSH2-201ENST00000233146 BMPR1BO00238 502 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 IGHG1P01857 330 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 NTSR1P30989 418 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 RPS18P62269 152 aaKnown RBP11.02□□□□□ -0.65
MSH2-201ENST00000233146 MRPL54Q6P161 138 aaKnown RBP11.02□□□□□ -0.65
MSH2-201ENST00000233146 ZNF818PQ6ZRF7 136 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 WDR5BQ86VZ2 330 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 MMD2Q8IY49 270 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 OR2AE1Q8NHA4 323 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 SYNGR2O43760 224 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 RPEL1Q2QD12 228 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 Q6ZPA2 131 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 C16orf52Q8NHV5 167 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 JMJD8Q96S16 334 aa11.02□□□□□ -0.65
MSH2-201ENST00000233146 A0A0G2JMM0 328 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 A0A1W2PPB8 328 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 C9orf118A6NHY6 69 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 KIR3DP1A8MWS1 328 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 SERPINE2P07093 398 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 IAPPP10997 89 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 CRYBB3P26998 211 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 HTD2P86397 168 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 HIST1H1AQ02539 215 aaPredicted RBP11.01□□□□□ -0.65
MSH2-201ENST00000233146 SHISA2Q6UWI4 295 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 SLC7A10Q9NS82 523 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 RALGAPA1Q6GYQ0 2036 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 PGCP20142 388 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 CD300EQ496F6 205 aaPredicted RBP11.01□□□□□ -0.65
MSH2-201ENST00000233146 TMEM52BQ4KMG9 183 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 GAPTQ8N292 157 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 LRP5LA4QPB2 252 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 SLC25A17O43808 307 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 AGFG2O95081 481 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 NUDT14O95848 222 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 PMP22Q01453 160 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 CCL14Q16627 93 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
MSH2-201ENST00000233146 COX19Q49B96 90 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 COLCA1Q6ZS62 124 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 HS3ST3A1Q9Y663 406 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 SELENOKQ9Y6D0 94 aa11.01□□□□□ -0.65
MSH2-201ENST00000233146 CACNA1IQ9P0X4 2223 aa11□□□□□ -0.65
MSH2-201ENST00000233146 PRKNO60260 465 aaPredicted RBP11□□□□□ -0.65
MSH2-201ENST00000233146 CYC1P08574 325 aa11□□□□□ -0.65
MSH2-201ENST00000233146 PTGDSP41222 190 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms