RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 FAM185AQ8N0U4 392 aa11.14□□□□□ -0.63
USP5-201ENST00000229268 VKORC1L1Q8N0U8 176 aa11.14□□□□□ -0.63
USP5-201ENST00000229268 HRH4Q9H3N8 390 aa11.14□□□□□ -0.63
USP5-201ENST00000229268 NGBQ9NPG2 151 aa11.14□□□□□ -0.63
USP5-201ENST00000229268 C17orf98A8MV24 154 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 IGKV1-39P01597 117 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 IGKV1D-39P04432 117 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 CD3EP07766 207 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 DLX1P56177 255 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 PPP1R35Q8TAP8 253 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 PLEKHF2Q9H8W4 249 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 RHOFQ9HBH0 211 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 CYTL1Q9NRR1 136 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 ZDHHC8Q9ULC8 765 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 ZNF705EA8MWA4 302 aaPredicted RBP11.13□□□□□ -0.63
USP5-201ENST00000229268 MGST3O14880 152 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 EIF3GO75821 320 aaKnown RBP eCLIP11.13□□□□□ -0.63
USP5-201ENST00000229268 CLDN1O95832 211 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 SPP1P10451 314 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 VDAC1P21796 283 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 UCP1P25874 307 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 RAB13P51153 203 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 C1orf174Q8IYL3 243 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 C5orf30Q96GV9 206 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 TUBD1Q9UJT1 453 aa11.13□□□□□ -0.63
USP5-201ENST00000229268 LRRK2Q5S007 2527 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 SLC31A2O15432 143 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 ADORA2A-AS1P86434 159 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 TMEM267Q0VDI3 215 aaPredicted RBP11.12□□□□□ -0.63
USP5-201ENST00000229268 SWI5Q1ZZU3 235 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 SNX22Q96L94 193 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 TMEM231Q9H6L2 316 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 VSTM5A8MXK1 200 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 SHISA9B4DS77 424 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 E5RGE8 158 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 H0Y980 276 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 K7N7A8 449 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 ZG16O60844 167 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 MMP23AO75900 390 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 C1QL1O75973 258 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 FABP1P07148 127 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 SRSF7Q16629 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP5-201ENST00000229268 ZNF462Q96JM2 2506 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
USP5-201ENST00000229268 M0R1X1 148 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 TMEM50AO95807 157 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 TNFRSF1AP19438 455 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 CHRNB4P30926 498 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 GPR12P47775 334 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 ZNF134P52741 427 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 ZNF585BQ52M93 769 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 LYPD2Q6UXB3 125 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 OR1S2Q8NGQ3 325 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 RNASE6Q93091 150 aaKnown RBP11.12□□□□□ -0.63
USP5-201ENST00000229268 TMEM56Q96MV1 263 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 KCNJ16Q9NPI9 418 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 TMEM56-RWDD3S4R434 201 aa11.12□□□□□ -0.63
USP5-201ENST00000229268 TNCP24821 2201 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 LINC00473A8K010 186 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 FCGR3BO75015 233 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 S1PR2O95136 353 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 ACAA1P09110 424 aaPredicted RBP11.11□□□□□ -0.63
USP5-201ENST00000229268 FHITP49789 147 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 PUSL1Q8N0Z8 303 aaKnown RBP11.11□□□□□ -0.63
USP5-201ENST00000229268 DMBX1Q8NFW5 382 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 SH3BGRL3Q9H299 93 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 WFDC1Q9HC57 220 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 GSN-AS1Q9NRJ2 163 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 LRRC30A6NM36 301 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 CCL3L1P16619 93 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 SRPXP78539 464 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 PRAMEF5Q5TYX0 476 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 LRTM2Q8N967 370 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 EGLN1Q9GZT9 426 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 CALYQ9NYX4 217 aa11.11□□□□□ -0.63
USP5-201ENST00000229268 TXNL1O43396 289 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 LHBP01229 141 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 LYG1Q8N1E2 194 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 OR2C3Q8N628 320 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 NUP37Q8NFH4 326 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 OR5D13Q8NGL4 314 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 OR4D5Q8NGN0 318 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 SPIN2AQ99865 258 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 SPIN2BQ9BPZ2 258 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 SIAH2O43255 324 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 MED6O75586 246 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 PRH1P02810 166 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 PVALBP20472 110 aaPredicted RBP11.1□□□□□ -0.63
USP5-201ENST00000229268 GZMHP20718 246 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 RND3P61587 244 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
USP5-201ENST00000229268 NMSQ5H8A3 153 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 AVPI1Q5T686 147 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 NCR3LG1Q68D85 454 aa11.1□□□□□ -0.63
USP5-201ENST00000229268 HSD17B13Q7Z5P4 300 aaPredicted RBP11.1□□□□□ -0.63
USP5-201ENST00000229268 DMRTC2Q8IXT2 367 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms