RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 C9JQL5 133 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 OR8U9P0C7N5 309 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 SPP1P10451 314 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 UCP1P25874 307 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 NKX2-1P43699 371 aaPredicted RBP12.58□□□□□ -0.39
PAF1-201ENST00000221265 POLR2GP62487 172 aaKnown RBP eCLIP12.58□□□□□ -0.39
PAF1-201ENST00000221265 TEX36Q5VZQ5 186 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 FAM53AQ6NSI3 398 aaPredicted RBP12.58□□□□□ -0.39
PAF1-201ENST00000221265 SPAG16Q8N0X2 631 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 FAM216BQ8N7L0 139 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 OR8U1Q8NH10 309 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 GAFA1Q96PS6 74 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 FAM212BQ9NTI7 297 aaPredicted RBP12.58□□□□□ -0.39
PAF1-201ENST00000221265 OR1A1Q9P1Q5 309 aa12.58□□□□□ -0.39
PAF1-201ENST00000221265 FAM24AA6NFZ4 105 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 K7N7A8 449 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 ADAM20O43506 726 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 PGLYRP1O75594 196 aaPredicted RBP12.58□□□□□ -0.4
PAF1-201ENST00000221265 LY6HO94772 140 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 DANCRP0C864 163 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.4
PAF1-201ENST00000221265 NMSQ5H8A3 153 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 CXorf66Q5JRM2 361 aaPredicted RBP12.58□□□□□ -0.4
PAF1-201ENST00000221265 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 MRGPRDQ8TDS7 321 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 SNX22Q96L94 193 aa12.58□□□□□ -0.4
PAF1-201ENST00000221265 IGHV1-69-2A0A0G2JMI3 117 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 CLEC18AA5D8T8 446 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 TNFSF12O43508 249 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 NPBWR1P48145 328 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 SRSF1Q07955 248 aaKnown RBP eCLIP12.57□□□□□ -0.4
PAF1-201ENST00000221265 C11orf71Q6IPW1 123 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 MOB1BQ7L9L4 216 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 CMTM1Q8IZ96 169 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 H1FOOQ8IZA3 346 aaPredicted RBP12.57□□□□□ -0.4
PAF1-201ENST00000221265 OR2C3Q8N628 320 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 CLEC18CQ8NCF0 446 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 OR1L1Q8NH94 360 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 SDSLQ96GA7 329 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 SPIN2AQ99865 258 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 SPIN2BQ9BPZ2 258 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 CABLES2Q9BTV7 478 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 SH3BGRL3Q9H299 93 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 SEBOXQ9HB31 216 aaPredicted RBP12.57□□□□□ -0.4
PAF1-201ENST00000221265 OR2W1Q9Y3N9 320 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 CELSR2Q9HCU4 2923 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 VPS13CQ709C8 3753 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 IGSF23A1L1A6 192 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 FAM157AC9JC47 383 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 H0Y980 276 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 SFTA3P0C7M3 94 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 COL8A2P25067 703 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 HMGN3Q15651 99 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 ZNF788Q6ZQV5 615 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 CBLN4Q9NTU7 201 aa12.57□□□□□ -0.4
PAF1-201ENST00000221265 FCN3O75636 299 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 SNAPINO95295 136 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 VDAC1P21796 283 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 SSTR5P35346 364 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 FHITP49789 147 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 DVL1P1P54792 670 aaPredicted RBP12.56□□□□□ -0.4
PAF1-201ENST00000221265 DHRS7BQ6IAN0 325 aaPredicted RBP12.56□□□□□ -0.4
PAF1-201ENST00000221265 HSD17B11Q8NBQ5 300 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 OR5D13Q8NGL4 314 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 OR10J5Q8NHC4 309 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 MAGT1Q9H0U3 335 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 LAMP3Q9UQV4 416 aa12.56□□□□□ -0.4
PAF1-201ENST00000221265 USP9YO00507 2555 aaPredicted RBP12.56□□□□□ -0.4
PAF1-201ENST00000221265 PPIAL4EA0A075B759 164 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 A6NNC1 897 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 PPIAL4DF5H284 164 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 MGST3O14880 152 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 H2AFB1P0C5Y9 115 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 PPIAL4FP0DN26 164 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 PPOXP50336 477 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 EDDM3BP56851 147 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 ID3Q02535 119 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 CBLN2Q8IUK8 224 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 ZNF561Q8N587 486 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 RFESDQ8TAC1 157 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 UBTD1Q9HAC8 227 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 CACFD1Q9UGQ2 172 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 PPIAL4AQ9Y536 164 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 ODAMA1E959 279 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 TMPRSS2O15393 492 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 SSSCA1O60232 199 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 HBZP02008 142 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 PVALBP20472 110 aaPredicted RBP12.55□□□□□ -0.4
PAF1-201ENST00000221265 F2RP25116 425 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 PAX5Q02548 391 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 MIDNQ504T8 468 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 LYPD2Q6UXB3 125 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 ODF3L1Q8IXM7 274 aa12.55□□□□□ -0.4
PAF1-201ENST00000221265 C1orf87Q8N0U7 546 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms