RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 HBE1P02100 147 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.45
CNOT3-201ENST00000221232 BMP5P22003 454 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 PAX6P26367 422 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 HBG1P69891 147 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 HBG2P69892 147 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 CLEC12BQ2HXU8 276 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 C4orf17Q53FE4 359 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 VHLLQ6RSH7 139 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 ZNF610Q8N9Z0 462 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 OR13A1Q8NGR1 328 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 WIPI2Q9Y4P8 454 aa12.27□□□□□ -0.45
CNOT3-201ENST00000221232 CHD3Q12873 2000 aaKnown RBP12.27□□□□□ -0.45
CNOT3-201ENST00000221232 LOC102723971A0A1B0GUV8 181 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 ZG16O60844 167 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 CECR9P0C854 216 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 RD3LP0DJH9 198 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 Q6ZT83 130 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 MOB1BQ7L9L4 216 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 WDR31Q8NA23 367 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 SLC25A22Q9H936 323 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 UNKLQ9H9P5 680 aaKnown RBP12.26□□□□□ -0.45
CNOT3-201ENST00000221232 GVINP1Q7Z2Y8 2422 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 IGHV3OR15-7A0A075B7D8 119 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 UBE2CO00762 179 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 IFNA17P01571 189 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 IGKV1D-33P01593 117 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 IGKV1-33P01594 117 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 TNFRSF9Q07011 255 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 ELOBQ15370 118 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 LRRC75BQ2VPJ9 315 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 Q3ZCU0 254 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 OR8G5Q8NG78 346 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 GATAD1Q8WUU5 269 aa12.26□□□□□ -0.45
CNOT3-201ENST00000221232 ODAMA1E959 279 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 RNF224P0DH78 156 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 BRWD1-AS2P59051 145 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 ZNF645Q8N7E2 425 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 OR2Z1Q8NG97 314 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 WDR61Q9GZS3 305 aaKnown RBP12.25□□□□□ -0.45
CNOT3-201ENST00000221232 SLC39A9Q9NUM3 307 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 CLCF1Q9UBD9 225 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 CLN5O75503 358 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 DEFB109BQ30KR1 87 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 WDR82Q6UXN9 313 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 ACP7Q6ZNF0 438 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 LRP11Q86VZ4 500 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 TAF15Q92804 592 aaKnown RBP eCLIP12.25□□□□□ -0.45
CNOT3-201ENST00000221232 LHX4Q969G2 390 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 TREM2Q9NZC2 230 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 DCHS1Q96JQ0 3298 aa12.25□□□□□ -0.45
CNOT3-201ENST00000221232 MAP1LC3B2A6NCE7 125 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 LINC00473A8K010 186 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 NPIPB11E5RHQ5 1161 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 AP4M1O00189 453 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 SLC25A6P12236 298 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 KHDC3LQ587J8 217 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 SP5Q6BEB4 398 aaPredicted RBP12.24□□□□□ -0.45
CNOT3-201ENST00000221232 INO80CQ6PI98 192 aaPredicted RBP12.24□□□□□ -0.45
CNOT3-201ENST00000221232 VKORC1L1Q8N0U8 176 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 SNIP1Q8TAD8 396 aaKnown RBP12.24□□□□□ -0.45
CNOT3-201ENST00000221232 SSX3Q99909 188 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 MAP1LC3BQ9GZQ8 125 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 TRGC2P03986 189 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 BCL2P10415 239 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 SPRNQ5BIV9 151 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 FAM90A2PQ658T7 463 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 RPP25LQ8N5L8 163 aaKnown RBP12.24□□□□□ -0.45
CNOT3-201ENST00000221232 KDF1Q8NAX2 398 aaPredicted RBP12.24□□□□□ -0.45
CNOT3-201ENST00000221232 NECAP1Q8NC96 275 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 OR5T1Q8NG75 326 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 SMDT1Q9H4I9 107 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 INTS1Q8N201 2190 aaKnown RBP12.24□□□□□ -0.45
CNOT3-201ENST00000221232 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.24□□□□□ -0.45
CNOT3-201ENST00000221232 GCH1P30793 250 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 TFF3Q07654 80 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 LRRC29Q8WV35 223 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 RPUSD4Q96CM3 377 aaKnown RBP12.24□□□□□ -0.45
CNOT3-201ENST00000221232 YPEL4Q96NS1 127 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
CNOT3-201ENST00000221232 SPTBN2O15020 2390 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 OOEPA6NGQ2 149 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 ZNF737O75373 536 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 IGHV2-5P01817 119 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 ACSM6Q6P461 480 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 H2BFWTQ7Z2G1 175 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 LEAP2Q969E1 77 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 ZNF83P51522 516 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 CYB5R2Q6BCY4 276 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 CD177Q8N6Q3 437 aa12.23□□□□□ -0.45
CNOT3-201ENST00000221232 METTL1Q9UBP6 276 aaKnown RBP12.23□□□□□ -0.45
CNOT3-201ENST00000221232 ROS1P08922 2347 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 LRRC30A6NM36 301 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 FGF7P21781 194 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 GFI1BQ5VTD9 330 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 SPNS3Q6ZMD2 512 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 DTD1Q8TEA8 209 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 LOXL4Q96JB6 756 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 RNF212BA8MTL3 300 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms