RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CENPMQ9NSP4 180 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 A0A0A6YYD4 124 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 ZNF253O75346 499 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 IFNA1P01562 189 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 ISG15P05161 165 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 ECI1P42126 302 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 LHX2P50458 406 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 PSG9Q00887 426 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 UEVLDQ8IX04 471 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 OR1K1Q8NGR3 316 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 RBM24Q9BX46 236 aaKnown RBP11.62□□□□□ -0.55
GABPB1-201ENST00000220429 WNT10AQ9GZT5 417 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 TMEM38BQ9NVV0 291 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 IGHV1-45A0A0A0MS14 117 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 HS3ST1O14792 307 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 HLA-HP01893 362 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 GPX1P07203 203 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 AZU1P20160 251 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 DYNLT3P51808 116 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 PPP1CBP62140 327 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 OR1B1Q8NGR6 318 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 CYYR1Q96J86 154 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 NXT1Q9UKK6 140 aaKnown RBP11.61□□□□□ -0.55
GABPB1-201ENST00000220429 TECTAO75443 2155 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 RTTNQ86VV8 2226 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 TMEM14DPA8MWL7 114 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 P2RY10O00398 339 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 LAMTOR5O43504 91 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 KLF7O75840 302 aaPredicted RBP11.61□□□□□ -0.55
GABPB1-201ENST00000220429 COX6A1P12074 109 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 YPEL3P61236 119 aaPredicted RBP11.61□□□□□ -0.55
GABPB1-201ENST00000220429 TMEM187Q14656 261 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 SLC22A24Q8N4F4 322 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 TMEM252Q8N6L7 170 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 C5orf17Q8NAS9 161 aa11.61□□□□□ -0.55
GABPB1-201ENST00000220429 PTRH2Q9Y3E5 179 aaKnown RBP11.61□□□□□ -0.55
GABPB1-201ENST00000220429 DPRXA6NFQ7 191 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 GYPAP02724 150 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 IGLC1P0CG04 106 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 S100GP29377 79 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 MFAP5Q13361 173 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 MBD3L1Q8WWY6 194 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 IMMP1LQ96LU5 166 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 C11orf1Q9H5F2 150 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 FAM206AQ9NX38 181 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 TBL2Q9Y4P3 447 aaKnown RBP11.6□□□□□ -0.55
GABPB1-201ENST00000220429 HIST3H3Q16695 136 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 DEFB125Q8N687 156 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 NRN1Q9NPD7 142 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 RPRMQ9NS64 109 aa11.6□□□□□ -0.55
GABPB1-201ENST00000220429 TRAPPC2LH3BP13 241 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 CST7O76096 145 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 WNT2P09544 360 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 KITLGP21583 273 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 TMEM50BP56557 158 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 PIGPP57054 158 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 MLF1P58340 268 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 CLRN1P58418 232 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 SPIN3Q5JUX0 258 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 PLPPR1Q8TBJ4 325 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 ZNF479Q96JC4 524 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 C18orf12Q96KH6 178 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 FBLN5Q9UBX5 448 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 LHFPL6Q9Y693 200 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 J3QR06 171 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 ZNF737O75373 536 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 CER1O95813 267 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 IGHG1P01857 330 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 TTRP02766 147 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 GPR6P46095 362 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-201ENST00000220429 MEF2BQ02080 365 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-201ENST00000220429 MPV17L2Q567V2 206 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 CARD17Q5XLA6 110 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 ARHGAP5-AS1Q96IT6 56 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 KIAA1549Q9HCM3 1950 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 F2Z2F3 143 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 MPIG6BO95866 241 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 CDAP32320 146 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 CKS1BP61024 79 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 SMAGPQ0VAQ4 97 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 ZNF726P1Q15940 193 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 LRTM2Q8N967 370 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 OXGR1Q96P68 337 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 OR51B2Q9Y5P1 312 aa11.59□□□□□ -0.55
GABPB1-201ENST00000220429 VSTM5A8MXK1 200 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 CCL3P10147 92 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 GDF1P27539 372 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 FOXL1Q12952 345 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 SLC25A47Q6Q0C1 308 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 ATOH7Q8N100 152 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 NAA60Q9H7X0 242 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 PROK2Q9HC23 129 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 TMEM250H0YL14 139 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 ZXDAP98168 799 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 BAXQ07812 192 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 SHISA2Q6UWI4 295 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 KCNG3Q8TAE7 436 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms