RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 LTBRP36941 435 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 OR10D4PQ8NGN7 298 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 GVINP1Q7Z2Y8 2422 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 IGHV3OR16-10A0A075B7F0 116 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 PSMB2P49721 201 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 BPIFA4PQ86YQ2 179 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 CTHRC1Q96CG8 243 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 KCNK7Q9Y2U2 307 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 ISG15P05161 165 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 PTGDSP41222 190 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 TMEM183BQ1AE95 376 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 SAXO1Q8IYX7 474 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 MRPL30Q8TCC3 161 aaKnown RBP16.29■□□□□ 0.2
SMPD3-201ENST00000219334 FAM216AQ8WUB2 273 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 AMELYQ99218 206 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 WNT5BQ9H1J7 359 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 JPT1Q9UK76 154 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 PXMP4Q9Y6I8 212 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 HIST1H1BP16401 226 aaKnown RBP16.29■□□□□ 0.2
SMPD3-201ENST00000219334 A0A1W2PP11 408 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 B4DEV8 164 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 CSRP1P21291 193 aaKnown RBP16.28■□□□□ 0.2
SMPD3-201ENST00000219334 GLRXP35754 106 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 LGALSLQ3ZCW2 172 aaPredicted RBP16.28■□□□□ 0.2
SMPD3-201ENST00000219334 AMMECR1LQ6DCA0 310 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 VPS25Q9BRG1 176 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 MPDU1O75352 247 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 IGF2P01344 180 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 ELOBQ15370 118 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 LRP11Q86VZ4 500 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 RFLNBQ8N5W9 214 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 SIGLEC12Q96PQ1 595 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 OR2A4O95047 310 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 PPOXP50336 477 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 FAM27E3Q08E93 113 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 OR2A7Q96R45 310 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 MAP1LC3CQ9BXW4 147 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 ZNF703Q9H7S9 590 aaPredicted RBP16.28■□□□□ 0.2
SMPD3-201ENST00000219334 C4orf51C9J302 202 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 NPIPB6E9PJ23 425 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 MAS1LP35410 378 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 CLDN18P56856 261 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 RELBQ01201 579 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 TMEM105Q8N8V8 129 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 IL22RA2Q969J5 263 aa16.28■□□□□ 0.2
SMPD3-201ENST00000219334 RND2P52198 227 aa16.27■□□□□ 0.2
SMPD3-201ENST00000219334 ACSF3Q4G176 576 aaPredicted RBP16.27■□□□□ 0.2
SMPD3-201ENST00000219334 TMEM189A5PLL7 270 aa16.27■□□□□ 0.2
SMPD3-201ENST00000219334 UBE2L6O14933 153 aa16.27■□□□□ 0.2
SMPD3-201ENST00000219334 PITX3O75364 302 aa16.27■□□□□ 0.2
SMPD3-201ENST00000219334 ATP6V0CP27449 155 aa16.27■□□□□ 0.2
SMPD3-201ENST00000219334 C19orf54Q5BKX5 351 aa16.27■□□□□ 0.2
SMPD3-201ENST00000219334 SIRT4Q9Y6E7 314 aaPredicted RBP16.27■□□□□ 0.2
SMPD3-201ENST00000219334 GDF9O60383 454 aa16.27■□□□□ 0.19
SMPD3-201ENST00000219334 SEC11BP0C7V7 166 aa16.27■□□□□ 0.19
SMPD3-201ENST00000219334 POM121Q96HA1 1249 aa16.27■□□□□ 0.19
SMPD3-201ENST00000219334 ZNF430Q9H8G1 570 aaPredicted RBP16.27■□□□□ 0.19
SMPD3-201ENST00000219334 IGKV3-11P04433 115 aa16.27■□□□□ 0.19
SMPD3-201ENST00000219334 OR4C13Q8NGP0 309 aa16.27■□□□□ 0.19
SMPD3-201ENST00000219334 FAM57AQ8TBR7 257 aa16.27■□□□□ 0.19
SMPD3-201ENST00000219334 NEU4Q8WWR8 484 aaPredicted RBP16.27■□□□□ 0.19
SMPD3-201ENST00000219334 LINC00470Q9BZP3 86 aa16.27■□□□□ 0.19
SMPD3-201ENST00000219334 TRBV5-5A0A0J9YX44 114 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 SIAH2O43255 324 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 SERF2P84101 59 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 DUX5Q96PT3 197 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 MMP9P14780 707 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 DPPA3Q6W0C5 159 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 SNRPCP09234 159 aaKnown RBP16.26■□□□□ 0.19
SMPD3-201ENST00000219334 FCGR2BP31994 310 aaPredicted RBP16.26■□□□□ 0.19
SMPD3-201ENST00000219334 TMEM204Q9BSN7 226 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 TMEM222Q9H0R3 208 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 TMEM140Q9NV12 185 aa16.26■□□□□ 0.19
SMPD3-201ENST00000219334 S1PR2O95136 353 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 C1QCP02747 245 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 MIEN1Q9BRT3 115 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 KCNE5Q9UJ90 142 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 CGB1A6NKQ9 187 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 MUC1P15941 1255 aaPredicted RBP16.25■□□□□ 0.19
SMPD3-201ENST00000219334 HSPE1P61604 102 aaKnown RBP16.25■□□□□ 0.19
SMPD3-201ENST00000219334 NEURL2Q9BR09 285 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 RFPL3SP0C7P2 107 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 ALX4Q9H161 411 aaPredicted RBP16.25■□□□□ 0.19
SMPD3-201ENST00000219334 FAM74A7A6NL05 159 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 CFDP00746 253 aaPredicted RBP16.25■□□□□ 0.19
SMPD3-201ENST00000219334 CXCL3P19876 107 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 AWAT1Q58HT5 328 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 QTRT1Q9BXR0 403 aaKnown RBP16.25■□□□□ 0.19
SMPD3-201ENST00000219334 NPIPB11E5RHQ5 1161 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 KLF7O75840 302 aaPredicted RBP16.25■□□□□ 0.19
SMPD3-201ENST00000219334 THY1P04216 161 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 TWIST1Q15672 202 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 C12orf57Q99622 126 aa16.25■□□□□ 0.19
SMPD3-201ENST00000219334 IGKV3D-15A0A087WSY6 115 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 IGKV3-15P01624 115 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 DLK1P80370 383 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 SRSF9Q13242 221 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMPD3-201ENST00000219334 PRSS53Q2L4Q9 553 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 FAM168AQ92567 244 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms