RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TGIF2LXQ8IUE1 241 aa22.02■■□□□ 1.11
CHMP4B-201ENST00000217402 DRAM1Q8N682 238 aa22.02■■□□□ 1.11
CHMP4B-201ENST00000217402 OR13C8Q8NGS7 320 aa22.02■■□□□ 1.11
CHMP4B-201ENST00000217402 RTN4IP1Q8WWV3 396 aaPredicted RBP22.02■■□□□ 1.11
CHMP4B-201ENST00000217402 IGLV2-14P01704 120 aa22.01■■□□□ 1.11
CHMP4B-201ENST00000217402 CCR6P51684 374 aa22.01■■□□□ 1.11
CHMP4B-201ENST00000217402 ZNF818PQ6ZRF7 136 aa22.01■■□□□ 1.11
CHMP4B-201ENST00000217402 MARCH1Q8TCQ1 289 aa22.01■■□□□ 1.11
CHMP4B-201ENST00000217402 MRPL20Q9BYC9 149 aaKnown RBP22.01■■□□□ 1.11
CHMP4B-201ENST00000217402 M0R1X1 148 aa22■■□□□ 1.11
CHMP4B-201ENST00000217402 PROP1O75360 226 aa22■■□□□ 1.11
CHMP4B-201ENST00000217402 GAPDHP04406 335 aaKnown RBP22■■□□□ 1.11
CHMP4B-201ENST00000217402 BTCP35070 178 aa22■■□□□ 1.11
CHMP4B-201ENST00000217402 DRAXINQ8NBI3 349 aaPredicted RBP22■■□□□ 1.11
CHMP4B-201ENST00000217402 ZNF436-AS1Q8NC38 126 aaPredicted RBP22■■□□□ 1.11
CHMP4B-201ENST00000217402 GNRHRP30968 328 aa21.99■■□□□ 1.11
CHMP4B-201ENST00000217402 ZNF816Q0VGE8 651 aaPredicted RBP21.99■■□□□ 1.11
CHMP4B-201ENST00000217402 ASAH1Q13510 395 aa21.99■■□□□ 1.11
CHMP4B-201ENST00000217402 GPHA2Q96T91 129 aa21.99■■□□□ 1.11
CHMP4B-201ENST00000217402 TEP1Q99973 2627 aaKnown RBP21.99■■□□□ 1.11
CHMP4B-201ENST00000217402 FN1P02751 2386 aaKnown RBP21.99■■□□□ 1.11
CHMP4B-201ENST00000217402 MXRA5Q9NR99 2828 aa21.99■■□□□ 1.11
CHMP4B-201ENST00000217402 A0A1W2PPI3 338 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 TNFSF12O43508 249 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 SLC22A5O76082 557 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 PI3P19957 117 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 ZNF48Q96MX3 618 aaPredicted RBP21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 IGHV1-3A0A0C4DH29 117 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 OOSP1A8MZH6 123 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 UCP3P55916 312 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 LINC00205P59089 165 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 CCDC144NLQ6NUI1 221 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 FAM71F2Q6NXP2 309 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 MOB3BQ86TA1 216 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 SLC38A6Q8IZM9 456 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 GAB2Q9UQC2 676 aa21.98■■□□□ 1.11
CHMP4B-201ENST00000217402 TIMM23O14925 209 aa21.97■■□□□ 1.11
CHMP4B-201ENST00000217402 CRLF1O75462 422 aa21.97■■□□□ 1.11
CHMP4B-201ENST00000217402 SCGB2A2Q13296 93 aa21.97■■□□□ 1.11
CHMP4B-201ENST00000217402 PHLDA2Q53GA4 152 aa21.97■■□□□ 1.11
CHMP4B-201ENST00000217402 LPCAT3Q6P1A2 487 aa21.97■■□□□ 1.11
CHMP4B-201ENST00000217402 GLDNQ6ZMI3 551 aaPredicted RBP21.97■■□□□ 1.11
CHMP4B-201ENST00000217402 ZDHHC16Q969W1 377 aa21.97■■□□□ 1.11
CHMP4B-201ENST00000217402 RSRP1Q9BUV0 290 aa21.97■■□□□ 1.11
CHMP4B-201ENST00000217402 IGHV3-72A0A0B4J1Y9 119 aa21.96■■□□□ 1.11
CHMP4B-201ENST00000217402 TXNL1O43396 289 aa21.96■■□□□ 1.11
CHMP4B-201ENST00000217402 OR8H3Q8N146 312 aa21.96■■□□□ 1.11
CHMP4B-201ENST00000217402 GPR31O00270 319 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 CT45A6P0DMU7 189 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 CT45A5P0DMU8 189 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 CT45A7P0DMV0 189 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 ECI1P42126 302 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 RAB13P51153 203 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 ARHGDIBP52566 201 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 DEFA1P59665 94 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 DEFA3P59666 94 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 MZT2BQ6NZ67 158 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 SIGLECL1Q8N7X8 197 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 POC5Q8NA72 575 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 BVESQ8NE79 360 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 RBMXL1Q96E39 390 aaKnown RBP21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 AKR1E2Q96JD6 320 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 NABP2Q9BQ15 211 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 MEGF9Q9H1U4 602 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 RBMS2Q15434 407 aaKnown RBP21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 MSMO1Q15800 293 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 ABCA11PQ4W5N1 156 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 CMTM1Q8IZ96 169 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 ZFAND1Q8TCF1 268 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 OCEL1Q9H607 264 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 VSIG4Q9Y279 399 aa21.95■■□□□ 1.1
CHMP4B-201ENST00000217402 CD24P25063 80 aa21.94■■□□□ 1.1
CHMP4B-201ENST00000217402 DUTP33316 252 aaKnown RBP21.94■■□□□ 1.1
CHMP4B-201ENST00000217402 DCTN2Q13561 401 aaKnown RBP21.94■■□□□ 1.1
CHMP4B-201ENST00000217402 SURF2Q15527 256 aaPredicted RBP21.94■■□□□ 1.1
CHMP4B-201ENST00000217402 ZBTB34Q8NCN2 500 aa21.94■■□□□ 1.1
CHMP4B-201ENST00000217402 SLC2A9Q9NRM0 540 aa21.94■■□□□ 1.1
CHMP4B-201ENST00000217402 C14orf166Q9Y224 244 aaKnown RBP21.94■■□□□ 1.1
CHMP4B-201ENST00000217402 LINC00473A8K010 186 aa21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 RLN1P04808 185 aa21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 LRRC75BQ2VPJ9 315 aa21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 ZNF383Q8NA42 475 aa21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 CFHR4Q92496 578 aa21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 SSX3Q99909 188 aa21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 SLC25A21Q9BQT8 299 aaPredicted RBP21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 PALMDQ9NP74 551 aa21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 GPR132Q9UNW8 380 aa21.93■■□□□ 1.1
CHMP4B-201ENST00000217402 FAM157CP0CG43 387 aa21.92■■□□□ 1.1
CHMP4B-201ENST00000217402 RPL30P62888 115 aaKnown RBP21.92■■□□□ 1.1
CHMP4B-201ENST00000217402 EIF4EBP1Q13541 118 aaPredicted RBP21.92■■□□□ 1.1
CHMP4B-201ENST00000217402 KCTD9Q7L273 389 aa21.92■■□□□ 1.1
CHMP4B-201ENST00000217402 OR51H1Q8NH63 302 aa21.92■■□□□ 1.1
CHMP4B-201ENST00000217402 TCTEX1D2Q8WW35 142 aa21.92■■□□□ 1.1
CHMP4B-201ENST00000217402 HSD17B10Q99714 261 aaKnown RBP21.92■■□□□ 1.1
CHMP4B-201ENST00000217402 C5orf66Q9H5L9 145 aa21.92■■□□□ 1.1
CHMP4B-201ENST00000217402 FAM240BA0A1B0GVZ2 78 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 NDUFB6O95139 128 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 CTSDP07339 412 aaPredicted RBP21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 SLC6A1P30531 599 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 BRS3P32247 399 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms