RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 DYNLT3P51808 116 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 F2RL1P55085 397 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 SWI5Q1ZZU3 235 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 C17orf58Q2M2W7 97 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 STX12Q86Y82 276 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 TGIF2LYQ8IUE0 185 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 DMRTC2Q8IXT2 367 aaPredicted RBP24.62■■□□□ 1.53
PABPN1-201ENST00000216727 HSD17B11Q8NBQ5 300 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 SPTA1P02549 2419 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 LINC00473A8K010 186 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 SIGLEC5O15389 551 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 GYPAP02724 150 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 TAS2R30P59541 319 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 ZNF816Q0VGE8 651 aaPredicted RBP24.61■■□□□ 1.53
PABPN1-201ENST00000216727 DUX4L9Q6RFH8 374 aaPredicted RBP24.61■■□□□ 1.53
PABPN1-201ENST00000216727 Q6ZRG5 221 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 CD300LFQ8TDQ1 290 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 CCL13Q99616 98 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 KBTBD11-OT1A0A1B0GTJ5 212 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 S1PR2O95136 353 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 SULT1A1P50225 295 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 OR2B11Q5JQS5 317 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 DCAF16Q9NXF7 216 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 CLN8Q9UBY8 286 aa24.61■■□□□ 1.53
PABPN1-201ENST00000216727 TRGV10A0A0A0MS01 117 aa24.6■■□□□ 1.53
PABPN1-201ENST00000216727 CLDN14O95500 239 aa24.6■■□□□ 1.53
PABPN1-201ENST00000216727 KRASP01116 189 aa24.6■■□□□ 1.53
PABPN1-201ENST00000216727 M6PRP20645 277 aa24.6■■□□□ 1.53
PABPN1-201ENST00000216727 SH3BGRL3Q9H299 93 aa24.6■■□□□ 1.53
PABPN1-201ENST00000216727 SAP30LQ9HAJ7 183 aa24.6■■□□□ 1.53
PABPN1-201ENST00000216727 DSCAML1Q8TD84 2053 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 DUTP33316 252 aaKnown RBP24.59■■□□□ 1.53
PABPN1-201ENST00000216727 G6PCP35575 357 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 LINC00574Q9H8X3 128 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 E7EQL1 145 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 PROP1O75360 226 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 CHRNB4P30926 498 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 ZCCHC24Q8N2G6 241 aaKnown RBP24.59■■□□□ 1.53
PABPN1-201ENST00000216727 FAM216BQ8N7L0 139 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 RNASE6Q93091 150 aaKnown RBP24.59■■□□□ 1.53
PABPN1-201ENST00000216727 PLPPR2Q96GM1 343 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 NARS2Q96I59 477 aaKnown RBP24.59■■□□□ 1.53
PABPN1-201ENST00000216727 CACFD1Q9UGQ2 172 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 GAB2Q9UQC2 676 aa24.59■■□□□ 1.53
PABPN1-201ENST00000216727 STRAPQ9Y3F4 350 aaKnown RBP24.59■■□□□ 1.53
PABPN1-201ENST00000216727 TMEM218A2RU14 115 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 MIDNQ504T8 468 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 C1orf87Q8N0U7 546 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 TMEM217Q8N7C4 229 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 CORO2AQ92828 525 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 TSNAXQ99598 290 aaKnown RBP24.58■■□□□ 1.53
PABPN1-201ENST00000216727 IFI27L2Q9H2X8 130 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 KCNJ16Q9NPI9 418 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 GFOD1Q9NXC2 390 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 HSPB7Q9UBY9 170 aa24.58■■□□□ 1.53
PABPN1-201ENST00000216727 RAI1Q7Z5J4 1906 aaPredicted RBP24.58■■□□□ 1.52
PABPN1-201ENST00000216727 TRAV38-1A0A0B4J264 116 aa24.57■■□□□ 1.52
PABPN1-201ENST00000216727 RAB7AP51149 207 aa24.57■■□□□ 1.52
PABPN1-201ENST00000216727 ZNF134P52741 427 aa24.57■■□□□ 1.52
PABPN1-201ENST00000216727 ATP5SQ99766 215 aa24.57■■□□□ 1.52
PABPN1-201ENST00000216727 CCL21O00585 134 aa24.57■■□□□ 1.52
PABPN1-201ENST00000216727 RAB29O14966 203 aa24.57■■□□□ 1.52
PABPN1-201ENST00000216727 TCF23Q7RTU1 214 aa24.57■■□□□ 1.52
PABPN1-201ENST00000216727 CTNNBIP1Q9NSA3 81 aaPredicted RBP24.57■■□□□ 1.52
PABPN1-201ENST00000216727 PSENENQ9NZ42 101 aa24.57■■□□□ 1.52
PABPN1-201ENST00000216727 NKX6-3A6NJ46 265 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 H3BP45 60 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 DFFBO76075 338 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 ATP6V0CP27449 155 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 UBE2KP61086 200 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 TNFRSF9Q07011 255 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 TMEM30BQ3MIR4 351 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 ZNF729A6NN14 1252 aaPredicted RBP24.56■■□□□ 1.52
PABPN1-201ENST00000216727 TRIM77I1YAP6 450 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 APOC3P02656 99 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 NCR3LG1Q68D85 454 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 NDRG3Q9UGV2 375 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 NBEAQ8NFP9 2946 aa24.56■■□□□ 1.52
PABPN1-201ENST00000216727 TANC2Q9HCD6 1990 aa24.55■■□□□ 1.52
PABPN1-201ENST00000216727 CD3EP07766 207 aa24.55■■□□□ 1.52
PABPN1-201ENST00000216727 IAPPP10997 89 aa24.55■■□□□ 1.52
PABPN1-201ENST00000216727 SRSF3P84103 164 aaKnown RBP24.55■■□□□ 1.52
PABPN1-201ENST00000216727 EFNB3Q15768 340 aa24.55■■□□□ 1.52
PABPN1-201ENST00000216727 GNPNAT1Q96EK6 184 aaPredicted RBP24.55■■□□□ 1.52
PABPN1-201ENST00000216727 MS4A5Q9H3V2 200 aa24.55■■□□□ 1.52
PABPN1-201ENST00000216727 ROS1P08922 2347 aa24.55■■□□□ 1.52
PABPN1-201ENST00000216727 B8ZZF3 427 aa24.54■■□□□ 1.52
PABPN1-201ENST00000216727 TMEM178BH3BS89 294 aa24.54■■□□□ 1.52
PABPN1-201ENST00000216727 APOBEC3AP31941 199 aaPredicted RBP24.54■■□□□ 1.52
PABPN1-201ENST00000216727 LINC00205P59089 165 aa24.54■■□□□ 1.52
PABPN1-201ENST00000216727 ABHD14AQ9BUJ0 271 aa24.54■■□□□ 1.52
PABPN1-201ENST00000216727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP24.54■■□□□ 1.52
PABPN1-201ENST00000216727 RBFOX2O43251 390 aaKnown RBP eCLIP24.54■■□□□ 1.523e-11■■□□□ 14.3
PABPN1-201ENST00000216727 AKR1C1Q04828 323 aa24.54■■□□□ 1.52
PABPN1-201ENST00000216727 H2BFWTQ7Z2G1 175 aa24.54■■□□□ 1.52
PABPN1-201ENST00000216727 UMAD1C9J7I0 102 aa24.53■■□□□ 1.52
PABPN1-201ENST00000216727 TMPRSS2O15393 492 aa24.53■■□□□ 1.52
PABPN1-201ENST00000216727 CAMLGP49069 296 aa24.53■■□□□ 1.52
PABPN1-201ENST00000216727 COQ3Q9NZJ6 369 aa24.53■■□□□ 1.52
PABPN1-201ENST00000216727 ADGRG4Q8IZF6 3080 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms