RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PNLIPRP3Q17RR3 467 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 Q3ZCU0 254 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 RAB12Q6IQ22 244 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 SLC25A48Q6ZT89 311 aaKnown RBP11.78□□□□□ -0.52
UPK3A-201ENST00000216211 ZNF439Q8NDP4 499 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 OR1L1Q8NH94 360 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 RAX2Q96IS3 184 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 CYYR1Q96J86 154 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 S1PR3Q99500 378 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 RASL11BQ9BPW5 248 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 THAP7Q9BT49 309 aaPredicted RBP11.78□□□□□ -0.52
UPK3A-201ENST00000216211 MCRIP2Q9BUT9 160 aaKnown RBP11.78□□□□□ -0.52
UPK3A-201ENST00000216211 BANF2Q9H503 90 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 SPACA1Q9HBV2 294 aa11.78□□□□□ -0.52
UPK3A-201ENST00000216211 SPINT2O43291 252 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 XRCC3O43542 346 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 BPNT1O95861 308 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 HBZP02008 142 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 ARSBP15848 533 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 RCC1P18754 421 aaPredicted RBP11.77□□□□□ -0.53
UPK3A-201ENST00000216211 RAB6AP20340 208 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 F2RL1P55085 397 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 MRPS10P82664 201 aaKnown RBP11.77□□□□□ -0.53
UPK3A-201ENST00000216211 CD69Q07108 199 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 DEFB136Q30KP8 78 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 CT45A1Q5HYN5 189 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 C6orf183Q5T699 404 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 AWAT2Q6E213 333 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 CT45A3Q8NHU0 189 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 TRIM63Q969Q1 353 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 DIABLOQ9NR28 239 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 GNG12Q9UBI6 72 aa11.77□□□□□ -0.53
UPK3A-201ENST00000216211 A0A0A6YYH2 397 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 UBE2QL1A1L167 161 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 A6NJ64 397 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 CCL24O00175 119 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 RFX2P48378 723 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 ZNF137PP52743 207 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 QRFPP83859 136 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 PLA2G7Q13093 441 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 CXorf66Q5JRM2 361 aaPredicted RBP11.76□□□□□ -0.53
UPK3A-201ENST00000216211 C5orf24Q7Z6I8 188 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 SMIM4Q8WVI0 70 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 MRPS24Q96EL2 167 aaKnown RBP11.76□□□□□ -0.53
UPK3A-201ENST00000216211 GON7Q9BXV9 100 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 SELENOIQ9C0D9 397 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 RAB22AQ9UL26 194 aa11.76□□□□□ -0.53
UPK3A-201ENST00000216211 MRPS7Q9Y2R9 242 aaKnown RBP11.76□□□□□ -0.53
UPK3A-201ENST00000216211 hCG_2014768A0A024R1R8 64 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 GABARAPH6UMI1 98 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 TXNL1O43396 289 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 LANCL1O43813 399 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 CRTAPO75718 401 aaPredicted RBP11.75□□□□□ -0.53
UPK3A-201ENST00000216211 SPNP16150 400 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 MGMTP16455 207 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 INPP1P49441 399 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 TAS2R20P59543 309 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 DGCR2P98153 550 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 FOXE3Q13461 319 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 TMEM69Q5SWH9 247 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 MZT2BQ6NZ67 158 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 GAPTQ8N292 157 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 FAM71E2Q8N5Q1 922 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 Q96M66 194 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 B9D2Q9BPU9 175 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 C11orf54Q9H0W9 315 aaPredicted RBP11.75□□□□□ -0.53
UPK3A-201ENST00000216211 RAB9BQ9NP90 201 aa11.75□□□□□ -0.53
UPK3A-201ENST00000216211 RYR3Q15413 4870 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 FAM90A10PA6NDY2 464 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 FAM90A7PA6NKC0 464 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 TMEM14DPA8MWL7 114 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 FAM90A23PA8MXZ1 464 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 UBBP0CG47 229 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 CFHR3Q02985 330 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 GNMTQ14749 295 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 TMEM30BQ3MIR4 351 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 MORN2Q502X0 79 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 ZNF57Q68EA5 555 aaPredicted RBP11.74□□□□□ -0.53
UPK3A-201ENST00000216211 SIGIRRQ6IA17 410 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 TRAT1Q6PIZ9 186 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 NRARPQ7Z6K4 114 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 OR8H1Q8NGG4 311 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 OR52L2PQ8NGH6 319 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 OR8U1Q8NH10 309 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 ATG5Q9H1Y0 275 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 KCNK15Q9H427 330 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 TAF9BQ9HBM6 251 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 OR2S2Q9NQN1 319 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 GHRLQ9UBU3 117 aa11.74□□□□□ -0.53
UPK3A-201ENST00000216211 RBMX2Q9Y388 322 aaKnown RBP11.74□□□□□ -0.53
UPK3A-201ENST00000216211 LINC00854A0A1B0GVQ3 168 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 LYRM1O43325 122 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 ELANEP08246 267 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 VSIG8P0DPA2 414 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 FUT3P21217 361 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 VDAC1P21796 283 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 CDX1P47902 265 aaPredicted RBP11.73□□□□□ -0.53
UPK3A-201ENST00000216211 BCAP31P51572 246 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 LUMP51884 338 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms