RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 STPG2Q8N412 459 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 NRIP2Q9BQI9 281 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PIPOXQ9P0Z9 390 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PPIAL4AQ9Y536 164 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 C16orf97H3BN30 126 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 GAPDHP04406 335 aaKnown RBP11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 BMI1P35226 326 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PNRC1Q12796 327 aaPredicted RBP11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PRNDQ9UKY0 176 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 DHRS7CA6NNS2 312 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 SNAI2O43623 268 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 DNLZQ5SXM8 178 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF714Q96N38 554 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 ANGPTL4Q9BY76 406 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF646O15015 1829 aaPredicted RBP11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 S1PR2O95136 353 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 GZMHP20718 246 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 PRR31Q5SQ13 230 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 SELENOHQ8IZQ5 122 aaKnown RBP11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 OR1L8Q8NGR8 309 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 CEACAM21Q3KPI0 293 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF818PQ6ZRF7 136 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 WDFY1Q8IWB7 410 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 C16orf92Q96LL3 132 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 RAMP1O60894 148 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF324O75467 553 aaPredicted RBP11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 BCL2P10415 239 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 PRDM14Q9GZV8 571 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 GHITMQ9H3K2 345 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 A0A087WV48 116 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 A0A0U1RQV5 110 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 K7N7A8 449 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 SLC25A17O43808 307 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 NMBP08949 121 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 LINC00869P0C866 280 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 PKIAP61925 76 aa11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 ZXDCQ2QGD7 858 aaPredicted RBP11.72□□□□□ -0.53
TGFBR3-201ENST00000212355 LOC107984156A0A0G2JMH3 177 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 PGPA6NDG6 321 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 DLX1P56177 255 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 ARL17AQ8IVW1 177 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 TMEM252Q8N6L7 170 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF552Q9H707 407 aaPredicted RBP11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 ZDHHC8Q9ULC8 765 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 BRS3P32247 399 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF645Q8N7E2 425 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF738Q8NE65 137 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 VSTM2AQ8TAG5 236 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 C5orf66Q9H5L9 145 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 QSER1Q2KHR3 1735 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 PF4V1P10720 104 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 GLIPR1P48060 266 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 C19orf48Q6RUI8 117 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 GMPPAQ96IJ6 420 aaPredicted RBP11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 DMRTA2Q96SC8 542 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 HSPB8Q9UJY1 196 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 TUBGCP6Q96RT7 1819 aa11.71□□□□□ -0.53
TGFBR3-201ENST00000212355 KLF7O75840 302 aaPredicted RBP11.71□□□□□ -0.54
TGFBR3-201ENST00000212355 SURF2Q15527 256 aaPredicted RBP11.71□□□□□ -0.54
TGFBR3-201ENST00000212355 ADTRPQ96IZ2 230 aa11.71□□□□□ -0.54
TGFBR3-201ENST00000212355 CXorf51AA0A1B0GTR3 108 aa11.71□□□□□ -0.54
TGFBR3-201ENST00000212355 TMEM189A5PLL7 270 aa11.71□□□□□ -0.54
TGFBR3-201ENST00000212355 MPTX1A8MV57 137 aa11.71□□□□□ -0.54
TGFBR3-201ENST00000212355 ISLRO14498 428 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 MOSP00540 346 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 CELA3AP09093 270 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 CD82P27701 267 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 LHFPL4Q7Z7J7 247 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 QTRT1Q9BXR0 403 aaKnown RBP11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 PILRAQ9UKJ1 303 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 FGFRL1Q8N441 504 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 PITPNC1Q9UKF7 332 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 CRYBB3P26998 211 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 FAM209BQ5JX69 171 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 C1orf185Q5T7R7 199 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 COL11A2P13942 1736 aaPredicted RBP11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 DXOO77932 396 aaKnown RBP11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 RPL39P5Q59GN2 51 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 C1QL2Q7Z5L3 287 aa11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 SNRNP200O75643 2136 aaKnown RBP11.7□□□□□ -0.54
TGFBR3-201ENST00000212355 ARF6P62330 175 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 FAM74A4Q5TZK3 123 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 HIST1H1EP10412 219 aaKnown RBP11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 HOXA6P31267 233 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 C2orf68Q2NKX9 166 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 CBLN4Q9NTU7 201 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 KIR2DL2P43627 348 aaPredicted RBP11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 FGF12P61328 243 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 KCNMB2Q9Y691 235 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 HYPMO75409 117 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 ZNF735P0CB33 412 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 ISXQ2M1V0 245 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms