RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 AP4M1O00189 453 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 PROP1O75360 226 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 NDUFA3O95167 84 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 RORCP51449 518 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 ACTBP60709 375 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 CD83Q01151 205 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 SLC35E3Q7Z769 313 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 COMMD1Q8N668 190 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 SAMD12Q8N8I0 201 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 MAFIPQ8WZ33 124 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 AP3S1Q92572 193 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 RASL11BQ9BPW5 248 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 GON7Q9BXV9 100 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 CMYA5Q8N3K9 4069 aa13.78□□□□□ -0.2
MRPL28-201ENST00000199706 NBR2O15453 112 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 SLC22A5O76082 557 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 SPDEFO95238 335 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 HLA-DRB1P01911 266 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 OPN1MWP04001 364 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 OPN1MW2P0DN77 364 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 OPN1MW3P0DN78 364 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 SOX6P35712 828 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 MMDQ15546 238 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 GPR107Q5VW38 600 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 FAM131AQ6UXB0 335 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 CENPVQ7Z7K6 275 aaPredicted RBP13.77□□□□□ -0.21
MRPL28-201ENST00000199706 HOGA1Q86XE5 327 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 PDPNQ86YL7 162 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 OR5AU1Q8NGC0 362 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 OR4X2Q8NGF9 303 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 ST6GALNAC5Q9BVH7 336 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 OR2D2Q9H210 308 aa13.77□□□□□ -0.21
MRPL28-201ENST00000199706 TPPPO94811 219 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 IGF1P05019 195 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 CSF1P09603 554 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 OR8U9P0C7N5 309 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 CD28P10747 220 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 F2RL1P55085 397 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 C9orf152Q5JTZ5 239 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 TMEM69Q5SWH9 247 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 OR8U1Q8NH10 309 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 RAB2BQ8WUD1 216 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 ADTRPQ96IZ2 230 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 ANAPC10Q9UM13 185 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 OR2W1Q9Y3N9 320 aa13.76□□□□□ -0.21
MRPL28-201ENST00000199706 NOTCH1P46531 2555 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 PSMB11A5LHX3 300 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 SH2D7A6NKC9 451 aaPredicted RBP13.75□□□□□ -0.21
MRPL28-201ENST00000199706 TUSC2O75896 110 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 HLA-DQB1P01920 261 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 APOA2P02652 100 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 RPL5P46777 297 aaKnown RBP13.75□□□□□ -0.21
MRPL28-201ENST00000199706 SLC35B1P78383 322 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 MSMO1Q15800 293 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 C5orf64Q2M2E5 130 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 STPG2Q8N412 459 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 ZNF383Q8NA42 475 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 BEST4Q8NFU0 473 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 NAA50Q9GZZ1 169 aaKnown RBP13.75□□□□□ -0.21
MRPL28-201ENST00000199706 SDHAF2Q9NX18 166 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 KIAA1456Q9P272 454 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 RNF150Q9ULK6 438 aa13.75□□□□□ -0.21
MRPL28-201ENST00000199706 ADARB2-AS1A8MUL3 147 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 M0R1X1 148 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 TSPAN15O95858 294 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 OR5H8P0DN80 308 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 ZNF182P17025 639 aaPredicted RBP13.74□□□□□ -0.21
MRPL28-201ENST00000199706 SLC6A1P30531 599 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 THBS3P49746 956 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 TMBIM6P55061 237 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 TAS2R20P59543 309 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 TCTEX1D4Q5JR98 221 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 MZT2AQ6P582 158 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 CITED2Q99967 270 aaPredicted RBP13.74□□□□□ -0.21
MRPL28-201ENST00000199706 ZNF107Q9UII5 783 aaPredicted RBP13.74□□□□□ -0.21
MRPL28-201ENST00000199706 TSSC4Q9Y5U2 329 aaPredicted RBP13.74□□□□□ -0.21
MRPL28-201ENST00000199706 MEGF8Q7Z7M0 2845 aa13.74□□□□□ -0.21
MRPL28-201ENST00000199706 H7C2Y5 167 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 RRASP10301 218 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 LUMP51884 338 aaPredicted RBP13.73□□□□□ -0.21
MRPL28-201ENST00000199706 ZNF645Q8N7E2 425 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 RNF152Q8N8N0 203 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 OR4F17Q8NGA8 305 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 OR4F4Q96R69 305 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 TSNAXQ99598 290 aaKnown RBP13.73□□□□□ -0.21
MRPL28-201ENST00000199706 SCPEP1Q9HB40 452 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 NECAP2Q9NVZ3 263 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 ADAM30Q9UKF2 790 aa13.73□□□□□ -0.21
MRPL28-201ENST00000199706 SMIM31A0A1B0GVY4 71 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 RRHO14718 337 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 EIF4EP06730 217 aaKnown RBP13.72□□□□□ -0.21
MRPL28-201ENST00000199706 NAT1P18440 290 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 CRIP2P52943 208 aaPredicted RBP13.72□□□□□ -0.21
MRPL28-201ENST00000199706 ARPC4P59998 168 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 CFHR3Q02985 330 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 GLDNQ6ZMI3 551 aaPredicted RBP13.72□□□□□ -0.21
MRPL28-201ENST00000199706 C11orf44Q8N8P7 122 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 OR5AP2Q8NGF4 316 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 DDB2Q92466 427 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 SNAPC3Q92966 411 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms