RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TMEM252Q8N6L7 170 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 TCTEX1D2Q8WW35 142 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 TMED6Q8WW62 240 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 BSCL2Q96G97 398 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 KAAG1Q9UBP8 84 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 LINC00312Q9Y6C7 94 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 CACNA1DQ01668 2161 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 IGSF23A1L1A6 192 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 C17orf98A8MV24 154 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 WRBO00258 174 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 TOR1AO14656 332 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 CHST1O43916 411 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 RAMP3O60896 148 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 PROP1O75360 226 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 CLDN14O95500 239 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 TMEM50AO95807 157 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 PLAUP00749 431 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 EPHA1P21709 976 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 DUTP33316 252 aaKnown RBP11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 PAX9P55771 341 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 Q3ZCU0 254 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 SAT2Q96F10 170 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 MAGT1Q9H0U3 335 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 WFDC1Q9HC57 220 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 IDI2-AS1Q9NZ38 188 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 FAM24AA6NFZ4 105 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 A8MXK9 166 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 TMPRSS2O15393 492 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 NDUFA2O43678 99 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 CAV2P51636 162 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF134P52741 427 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 TAS2R30P59541 319 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 NHLH2Q02577 135 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 LTC4SQ16873 150 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF439Q8NDP4 499 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 CCL17Q92583 94 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 GINS3Q9BRX5 216 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 SLC25A10Q9UBX3 287 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 LPAR3Q9UBY5 353 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 WSB1Q9Y6I7 421 aa11.83□□□□□ -0.52
RTFDC1-201ENST00000023939 IGHV1-69-2A0A0G2JMI3 117 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 MEX3AA1L020 520 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 LINC00473A8K010 186 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 NUDT19A8MXV4 375 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 SEC11BP0C7V7 166 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 SULT1A2P50226 295 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 PPOXP50336 477 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 BTNL3Q6UXE8 466 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF295-AS1Q8N0V1 137 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 MUC15Q8N387 334 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 SMIM8Q96KF7 97 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 ABHD14AQ9BUJ0 271 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 RPUSD1Q9UJJ7 312 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 SESN1Q9Y6P5 492 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 ICE1Q9Y2F5 2266 aa11.82□□□□□ -0.52
RTFDC1-201ENST00000023939 TANC2Q9HCD6 1990 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 ARID1AO14497 2285 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 I3L521 148 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 RAB29O14966 203 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 SYNGR2O43760 224 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 S1PR2O95136 353 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 ARHGDIBP52566 201 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 RPL23AP62750 156 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 IZUMO4Q1ZYL8 232 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 MIDNQ504T8 468 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 CT45A1Q5HYN5 189 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 ODF3L1Q8IXM7 274 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 CT45A3Q8NHU0 189 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 GAL3ST2Q9H3Q3 398 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 RAI1Q7Z5J4 1906 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-201ENST00000023939 FAM90A9PA6NNJ1 464 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 TXNL1O43396 289 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 NDUFB7P17568 137 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 AGAP20933 346 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 OMGP23515 440 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF266Q14584 549 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 NCR3LG1Q68D85 454 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 HSPB7Q9UBY9 170 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 M0R1X1 148 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 NDUFB3O43676 98 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 MED6O75586 246 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 FCN3O75636 299 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 HPRT1P00492 218 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 SPP1P10451 314 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF816Q0VGE8 651 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 AARDQ4LEZ3 155 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 C4orf17Q53FE4 359 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 LRRC10Q5BKY1 277 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 DDB2Q92466 427 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 C19orf12Q9NSK7 152 aa11.8□□□□□ -0.52
RTFDC1-201ENST00000023939 RAB19A4D1S5 217 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms