RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Q80X32 188 aaKnown RBP13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Zfp87Q8K2A4 540 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr46Q8VGJ4 318 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Defb7Q91V70 71 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Med28Q920D3 178 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Wdr20Q9D5R2 567 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ndufb8Q9D6J5 186 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr878Q9EQA9 314 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm12830F6XVH0 157 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ube2nP61089 152 aaKnown RBP13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ctf1Q60753 203 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 IslrQ6GU68 428 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 RinlQ80UW3 563 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Mrpl48Q8JZS9 211 aaKnown RBP13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Nfam1Q8R4V1 264 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Elovl6Q920L5 267 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Znf281Q99LI5 893 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 4930412O13RikQ9D5M9 106 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Suv39h2Q9EQQ0 477 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Bin3Q9JI08 253 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr1289A0A288CFY5 326 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm6890A2BG94 208 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr1348F6VB59 318 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn2r82G3UWA2 865 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm21789J3QMZ1 123 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm21870J3QPN2 123 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm21883J3QPV3 123 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Mdh2P08249 338 aaKnown RBP13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 DaoP18894 345 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Rab18P35293 206 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 FauP35545 74 aaKnown RBP13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Rasd2P63032 266 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 PkiaP63248 76 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 ElaneQ3UP87 265 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Zfp455Q7M6X9 461 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ss18l1Q8BW22 402 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Lingo1Q9D1T0 614 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Rbfox1Q9JJ43 396 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Suclg1Q9WUM5 346 aaKnown RBP13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 PipP02816 146 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 GrprP21729 384 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Bloc1s3Q5U5M8 195 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Oas1bQ60856 376 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr876Q7TRE4 310 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Mib2Q8R516 973 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr469Q8VF66 314 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 PpifQ99KR7 206 aaKnown RBP13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Nqo2Q9JI75 231 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Dkkl1Q9QZL9 230 aa13.59□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm35060A0A140LIV7 231 aa13.58□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr1158A2BHP7 313 aa13.58□□□□□ -0.23
Trim39-203ENSMUST00000113706 Efna2P52801 209 aa13.58□□□□□ -0.23
Trim39-203ENSMUST00000113706 Paqr7Q80ZE4 345 aa13.58□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cd200r5Q8BTP3 270 aa13.58□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r178Q8R2B6 304 aa13.58□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr168Q8VF05 312 aa13.58□□□□□ -0.23
Trim39-203ENSMUST00000113706 Trav15d-1-dv6d-1A0A075B624 124 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Prr19B2RW88 366 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1410E9PYK6 323 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 TectbO08524 329 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Sp100O35892 482 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cd1d1P11609 336 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cd1d2P11610 336 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Npbwr1P49681 329 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Arpc4P59999 168 aaKnown RBP13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Dynlrb1P62627 96 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 PmelQ60696 626 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1357Q7TQU7 313 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 D330020A13RikQ8C799 211 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1342Q8VFY3 315 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Pear1Q8VIK5 1034 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Alkbh4Q9D8F1 300 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1264Q9R0K2 308 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Wdr86D3Z757 380 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tex45G3XA23 500 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm5458L7N219 204 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tdpoz1P0DMR5 365 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Mmp9P41245 730 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tob1Q61471 362 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm21093Q6GQS8 569 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Nsun5Q8K4F6 465 aaKnown RBP13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tmem51Q99LG1 249 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 B3GNT2Q9Z222 397 aa13.58□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ighv1-34A0A075B5V2 117 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1471F6QVZ8 314 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Slc18a3O35304 530 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 CycsP62897 105 aaKnown RBP13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1340Q3KPC7 315 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Mfsd4b3Q3UN21 355 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fam57aQ5ND56 257 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Klf2Q60843 354 aaKnown RBP13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Mtch1Q791T5 389 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Pramel5Q7TPY4 500 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 PigmQ8C2R7 423 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Dcun1d4Q8CCA0 292 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fam110aQ8R184 296 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cst14Q8VII3 130 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 S1pr5Q91X56 400 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 OcstampQ9D611 498 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Dtd1Q9DD18 209 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms