RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 P01658 132 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Tdpoz1P0DMR5 365 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 CtsaP16675 474 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Mdga2P60755 949 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Crisp3Q03402 241 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1340Q3KPC7 315 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fbxo27Q6DIA9 280 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Cypt4Q6P925 153 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Stk17bQ8BG48 372 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr480Q8VEZ0 312 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr508Q8VG42 310 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1240Q8VG73 314 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Defb7Q91V70 71 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 MpiQ924M7 423 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Pdzd11Q9CZG9 140 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Naa60Q9DBU2 242 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Hsd17b11Q9EQ06 298 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Cldn15Q9Z0S5 227 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Tnrc6aQ3UHK8 1896 aaKnown RBP10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 A0A286YD13 301 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ube2dnl1A2AFH1 155 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fthl17bA2AHC5 176 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fthl17cA2AHC6 176 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr231E9Q0M4 307 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Zfp108E9Q8I5 642 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1507Q0VEP0 313 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fthl17fQ3SXD2 176 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Tmem171Q4KL18 322 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Epha5Q60629 876 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Btn1a1Q62556 524 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1341Q7TQV4 312 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr452Q7TRV8 317 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 BmperQ8CJ69 685 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gpr153Q8K0Z9 631 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr24Q8VFM9 313 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr38Q8VGP4 317 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ube2v2Q9D2M8 145 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Wwtr1Q9EPK5 395 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Rspo1Q9Z132 265 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Zfp407G3UVV3 2246 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm45692D3Z0A0 150 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 C2cd4dP0CG09 341 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Sdr39u1Q5M8N4 308 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Rasl2-9Q61820 216 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Usf2Q64705 346 aaKnown RBP10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Cstl1Q80Y72 140 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Xkr8Q8C0T0 401 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 TbceQ8CIV8 524 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gas2l1Q8JZP9 678 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Acer2Q8VD53 275 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1324Q8VEU7 332 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr916Q8VG53 310 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ddah2Q99LD8 285 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr157Q9QZ20 318 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Xcr1Q9R0M1 322 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm7233E9PZI8 198 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm9732F6QVC4 198 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm2075J3QMW5 144 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm8104K7N744 198 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fabp9O08716 132 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Atf6bO35451 699 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Polr2gP62488 172 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Mcrip1Q3UGS4 97 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 BB287469Q3UT53 144 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 6430531B16RikQ3V2J1 307 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Wdr34Q5U4F6 535 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Adat3Q6PAT0 349 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1042Q7TR81 313 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr305Q7TS02 319 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Mfsd8Q8BH31 519 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Rnf122Q8BP31 155 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Sft2d2Q8VD57 159 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Rbfox1Q9JJ43 396 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ube2j1Q9JJZ4 318 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 MvkQ9R008 395 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1089A0A1L1SRK6 311 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm12790B1AUV6 201 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm20403G3UYB0 123 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Vmn1r80L7N1Z3 308 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Zfand5O88878 213 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Adh1P00329 375 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Cd84Q18PI6 329 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Nkain3Q3URJ8 181 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr10Q60883 311 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 St8sia3Q64689 380 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 S100a15aQ6S5I3 108 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ppp1r14dQ7TT52 146 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm9837Q8C607 126 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr156Q8VGA9 318 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Cpn1Q9JJN5 457 aa10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ndufa7Q9Z1P6 113 aaKnown RBP10.05□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Vmn1r138D3YTY2 306 aa10.04□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm8693E9PW18 306 aa10.04□□□□□ -0.8
Col9a1-202ENSMUST00000088349 A630073D07RikE9PWS6 100 aa10.04□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm9772F6XPD8 135 aa10.04□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm4498K9J7G4 306 aa10.04□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Vmn1r118L7N273 306 aa10.04□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Prkar2aP12367 401 aa10.04□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Hoxb1P17919 297 aa10.04□□□□□ -0.8
Col9a1-202ENSMUST00000088349 P2ry1P49650 373 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms