RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Cldn20G5E8X0 219 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 P01668 110 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Gnb2P62880 340 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Ldlrad2Q3V0V0 142 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Fbxl2Q8BH16 423 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Tmem108Q8BHE4 574 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Vash2Q8C5G2 355 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Nsun3Q8CCT7 348 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 SdhaQ8K2B3 664 aaKnown RBP8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr362Q8VGV7 317 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Uqcc1Q9CWU6 295 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Slc10a6Q9CXB2 373 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Ube2fQ9CY34 185 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 2610524H06RikQ9CZU9 139 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Bola1Q9D8S9 137 aaKnown RBP8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Wwtr1Q9EPK5 395 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr943Q9EQ92 314 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr951Q9EQ94 314 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Ctnnbip1Q9JJN6 81 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Abca15E9PWH4 1668 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr1118A0A0J9YUE7 307 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Gm4787B2RUD9 748 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Brs3O54798 399 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Gosr1O88630 250 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Emp2O88662 172 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Ifna2P01573 190 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Meox2P32443 303 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Ctf2P83714 204 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 McptlQ00356 246 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Chst14Q80V53 376 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Pqlc2Q8C4N4 293 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Rpp21Q8R040 150 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 S1pr5Q91X56 400 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Dram2Q9CR48 267 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Utp23Q9CX11 249 aaKnown RBP8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr1224-ps1A3KGY4 311 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Evx1P23683 416 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Rac3P60764 192 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Smad4P97471 551 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Vmn1r236Q05A06 334 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Clec12bQ149M0 275 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Rnf223Q3UV31 285 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Scgb2b24Q7M747 112 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Fbxw26Q8BI58 466 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr1239Q8VGM8 305 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Mtfp1Q9CRB8 166 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Rep15Q9D7T1 230 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Tmem9bQ9JJR8 199 aa8.17□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Zfp971A2BFG8 470 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Gm10036E9PYL9 178 aaKnown RBP8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 MfngO09008 321 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 UcnP81615 122 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Zfp970Q08BU3 522 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Prss38Q3UKY7 322 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Zfp772Q3UQL6 416 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Slc25a26Q5U680 274 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Hand1Q64279 216 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Znf784Q8BI69 297 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Scrt2Q8BTH6 311 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 LiphQ8CIV3 451 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Ier5lQ99J55 406 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Mrpl24Q9CQ06 216 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Lamtor1Q9CQ22 161 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Qrsl1Q9CZN8 525 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Erv3Q9DAX3 200 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Fbxl6Q9QXW0 535 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Plp2Q9R1Q7 152 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Tmem240B2RWJ3 173 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Gm6569D3YTM9 175 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Vmn1r160E9Q346 307 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Vmn1r123L7N270 307 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Ascl5M0QWB7 188 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Rpl30P62889 115 aaKnown RBP8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Cxxc4Q6NXI8 198 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Pitpnc1Q8K4R4 332 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Stxbp6Q8R3T5 210 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr215Q8VF82 310 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr1138Q8VFQ9 311 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Mrps16Q9CPX7 135 aaKnown RBP8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Tmprss2Q9JIQ8 490 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Plin4O88492 1403 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Nlgn4lB0F2B4 945 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 CtgfP29268 348 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 G6pcP35576 357 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Gabra1P62812 455 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 H2-T22Q31615 379 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr1340Q3KPC7 315 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Cks1brtQ3UNC9 96 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Gm21943Q5FWD5 227 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Derl3Q9D8K3 228 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Susd2Q9DBX3 820 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Pycr3Q9DCC4 274 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Aurkaip1Q9DCJ7 200 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Fiz1Q9WTJ4 500 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Skp2Q9Z0Z3 424 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr789A0A1L1SV77 312 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Esp23A8R0V5 104 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Olfr544E9PX47 334 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Slc45a2P58355 530 aa8.16□□□□□ -1.1
Ccdc47-201ENSMUST00000002043 Ybx1P62960 322 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms