RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 BET1O15155 118 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 FABP7O15540 132 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 TSPAN15O95858 294 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 MOSP00540 346 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 TALDO1P37837 337 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 OR4A4PQ8NGN8 299 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 NABP2Q9BQ15 211 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 ZNF251Q9BRH9 671 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 AGMATQ9BSE5 352 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 PLSCR3Q9NRY6 295 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 TMEM235A6NFC5 223 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 FGF16O43320 207 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 FBXO24O75426 580 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 F2RL1P55085 397 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 C10orf99Q6UWK7 81 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 OR13F1Q8NGS4 319 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 NUDCD2Q8WVJ2 157 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.73□□□□□ -0.21
PHGDH-227ENST00000641811 RDH8Q9NYR8 311 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 ETV7Q9Y603 341 aa13.73□□□□□ -0.21
PHGDH-227ENST00000641811 LINC01548A6NM66 108 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 ITGB1BP1O14713 200 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 RAB29O14966 203 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 NCS1P62166 190 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 KIR2DS1Q14954 304 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 ZNF260Q3ZCT1 412 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 HACD4Q5VWC8 232 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 CENPVQ7Z7K6 275 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-227ENST00000641811 Q8N9W7 124 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 OR5AU1Q8NGC0 362 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 RITA1Q96K30 269 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 CABLES2Q9BTV7 478 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 ST6GALNAC5Q9BVH7 336 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 PIPOXQ9P0Z9 390 aa13.72□□□□□ -0.21
PHGDH-227ENST00000641811 TET2Q6N021 2002 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-227ENST00000641811 WNK1Q9H4A3 2382 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 TRAV18A0A075B6X5 111 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 SSX5O60225 188 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 PROP1O75360 226 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 GSTP1P09211 210 aaKnown RBP13.71□□□□□ -0.21
PHGDH-227ENST00000641811 CT45A6P0DMU7 189 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 CT45A5P0DMU8 189 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 CT45A7P0DMV0 189 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 SCAND1P57086 179 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 VBP1P61758 197 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 ARL6IP1Q15041 203 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 GLDNQ6ZMI3 551 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-227ENST00000641811 FAM110DQ8TAY7 271 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-227ENST00000641811 EDARADDQ8WWZ3 215 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 NOL4LQ96MY1 436 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-227ENST00000641811 S1PR3Q99500 378 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 CITED2Q99967 270 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-227ENST00000641811 NAA50Q9GZZ1 169 aaKnown RBP13.71□□□□□ -0.21
PHGDH-227ENST00000641811 LINC00527Q9UJ94 153 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 SPATA2Q9UM82 520 aa13.71□□□□□ -0.21
PHGDH-227ENST00000641811 TRBV6-7A0A0A0MS04 114 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 SCGNO76038 276 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 CSF1P09603 554 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 DTYMKP23919 212 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 CNTFRP26992 372 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 SERPINB10P48595 397 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 LINC00205P59089 165 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 C2orf68Q2NKX9 166 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 TCTEX1D4Q5JR98 221 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 FAM131AQ6UXB0 335 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 DRAXINQ8NBI3 349 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-227ENST00000641811 OR10J5Q8NHC4 309 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 PHF21AQ96BD5 680 aa13.7□□□□□ -0.22
PHGDH-227ENST00000641811 ADARB2-AS1A8MUL3 147 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 IGHG2P01859 326 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 OR8U9P0C7N5 309 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 PTHLHP12272 177 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 GPR12P47775 334 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 GNG2P59768 71 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 ACTBP60709 375 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 SRSF7Q16629 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
PHGDH-227ENST00000641811 FAM71F2Q6NXP2 309 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 Q6ZS49 121 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 SLC35E3Q7Z769 313 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 CROCCP3Q8IVE0 287 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 FAM71E2Q8N5Q1 922 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 OR8U1Q8NH10 309 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 RASL11BQ9BPW5 248 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 TOLLIPQ9H0E2 274 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 ABCG5Q9H222 651 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 LIN7CQ9NUP9 197 aaKnown RBP13.69□□□□□ -0.22
PHGDH-227ENST00000641811 ZNF221Q9UK13 617 aa13.69□□□□□ -0.22
PHGDH-227ENST00000641811 A0A1W2PRX2 142 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 MMDQ15546 238 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 PNLIPRP3Q17RR3 467 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 ZNF329Q86UD4 541 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 OR8H1Q8NGG4 311 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 SLC25A46Q96AG3 418 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 HSPB9Q9BQS6 159 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 GINS4Q9BRT9 223 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 MRPS26Q9BYN8 205 aaKnown RBP13.68□□□□□ -0.22
PHGDH-227ENST00000641811 MMP27Q9H306 513 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 GHITMQ9H3K2 345 aa13.68□□□□□ -0.22
PHGDH-227ENST00000641811 H0YJW9 148 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms