RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 TMEM86AQ8N2M4 240 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 ZNF645Q8N7E2 425 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 OR4S1Q8NGB4 309 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 OR4D6Q8NGJ1 314 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 DOK4Q8TEW6 326 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 C15orf40Q8WUR7 153 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 RORBQ92753 470 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 PTX4Q96A99 478 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 TM4SF18Q96CE8 201 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 ZFP3Q96NJ6 502 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 TIMM17AQ99595 171 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 HSD17B10Q99714 261 aaKnown RBP1.66□□□□□ -2.14
ATM-230ENST00000640388 COPS4Q9BT78 406 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 FRMD8P1Q9BZ68 369 aaPredicted RBP1.66□□□□□ -2.14
ATM-230ENST00000640388 CENPHQ9H3R5 247 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 ZSCAN16Q9H4T2 348 aaPredicted RBP1.66□□□□□ -2.14
ATM-230ENST00000640388 HMG20AQ9NP66 347 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 OR2S2Q9NQN1 319 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 MRM2Q9UI43 246 aaKnown RBP1.66□□□□□ -2.14
ATM-230ENST00000640388 VAX2Q9UIW0 290 aa1.66□□□□□ -2.14
ATM-230ENST00000640388 NXT1Q9UKK6 140 aaKnown RBP1.66□□□□□ -2.14
ATM-230ENST00000640388 PCYT1BQ9Y5K3 369 aaPredicted RBP1.66□□□□□ -2.14
ATM-230ENST00000640388 TNCP24821 2201 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 SORL1Q92673 2214 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 TRAV8-4A0A0B4J246 113 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 TMEM213A2RRL7 107 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 TVP23AA6NH52 213 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 B4DSR2 109 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 K7EN84 100 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 M0R1B8 84 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 BPY2O14599 106 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 GCM2O75603 506 aaPredicted RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 SLC22A5O76082 557 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 TRBV12-3P01733 135 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 P01737 135 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 MSMBP08118 114 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 DTYMKP23919 212 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 APLNRP35414 380 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 UGT2B10P36537 528 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 POLR2IP36954 125 aaKnown RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 CRATP43155 626 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 NDUFA8P51970 172 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 CDKN2DP55273 166 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 MTPNP58546 118 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 ESRRGP62508 458 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 RPL23P62829 140 aaKnown RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 CACNG7P62955 275 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 CRADDP78560 199 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 DCDP81605 110 aaKnown RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 PPIDQ08752 370 aaKnown RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 PNOCQ13519 176 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 OR4D1Q15615 310 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 ALX1Q15699 326 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 CDNFQ49AH0 187 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 SYT6Q5T7P8 510 aaPredicted RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 Q5W150 140 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 RESP18Q5W5W9 173 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 FBXW9Q5XUX1 488 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 ZNF470Q6ECI4 717 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 EPGNQ6UW88 154 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 BHLHA15Q7RTS1 189 aaPredicted RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 MRPL52Q86TS9 123 aaKnown RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 SETD3Q86TU7 594 aaPredicted RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 ZFP62Q8NB50 900 aaPredicted RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 MNS1Q8NEH6 495 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 WFDC9Q8NEX5 89 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 OR7G1Q8NGA0 311 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 OR1S1Q8NH92 325 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 GTF2H4Q92759 462 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 LRRC45Q96CN5 670 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 RMI2Q96E14 147 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 MRPL48Q96GC5 212 aaKnown RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 PDCD1LG2Q9BQ51 273 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 API5Q9BZZ5 524 aaKnown RBP1.65□□□□□ -2.15
ATM-230ENST00000640388 C1orf198Q9H425 327 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 UCK1Q9HA47 277 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 PLEKHA1Q9HB21 404 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 ACOT13Q9NPJ3 140 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 CYB5R1Q9UHQ9 305 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 KMT2DO14686 5537 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
ATM-230ENST00000640388 IGHV1-45A0A0A0MS14 117 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 TRAV40A0A0B4J280 105 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 FAM240AA0A1B0GVK7 77 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 MDFIC2A0A1B0GVS7 189 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 C7orf66A4D0T2 115 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 KRBOX1C9JBD0 128 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 E7EQ34 232 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 CRXO43186 299 aaPredicted RBP1.64□□□□□ -2.15
ATM-230ENST00000640388 CDK14O94921 469 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 GLSO94925 669 aaPredicted RBP1.64□□□□□ -2.15
ATM-230ENST00000640388 VAMP5O95183 116 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 BRI3O95415 125 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 EPPINO95925 133 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 PTTG1O95997 202 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 ADRA2AP08913 450 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 GGT2P36268 569 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 TALDO1P37837 337 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 RANBP1P43487 201 aa1.64□□□□□ -2.15
ATM-230ENST00000640388 EFNA4P52798 201 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms