RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 HSPB8Q9UJY1 196 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 CLDN18P56856 261 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 STPG2Q8N412 459 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 ZNF735P0CB33 412 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 MPV17P39210 176 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 RUNX1Q01196 453 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 SNAI3Q3KNW1 292 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 ZNF645Q8N7E2 425 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 PXMP4Q9Y6I8 212 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 TWIST1Q15672 202 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 HCP5Q6MZN7 132 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 SLC25A47Q6Q0C1 308 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 TUBA4BQ9H853 241 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 PILRBQ9UKJ0 227 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 TNFSF18Q9UNG2 199 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.371e-17■□□□□ 9.1
HNRNPU-226ENST00000640218 DEFB121Q5J5C9 76 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 SIRT7Q9NRC8 400 aa12.72□□□□□ -0.37
HNRNPU-226ENST00000640218 VSIG10L2P0DP72 767 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 DLX1P56177 255 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 LRRC75BQ2VPJ9 315 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 POM121Q96HA1 1249 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 FAM106CPP0CH98 169 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 FSTP19883 344 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 LOXL4Q96JB6 756 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 TRAF4Q9BUZ4 470 aaPredicted RBP12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 SCNM1Q9BWG6 230 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 ZNF250P15622 560 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 MEOX2P50222 304 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 OR4A5Q8NH83 315 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 SAP25Q8TEE9 199 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 IL19Q9UHD0 177 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 M0R143 59 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 OVCH2Q7RTZ1 564 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
HNRNPU-226ENST00000640218 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 EPOPA6NHQ4 379 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 CDCP2Q5VXM1 449 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 FAM74A7A6NL05 159 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 CD1AP06126 327 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 OR10J1P30954 320 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 IZUMO4Q1ZYL8 232 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 GCSAMQ8N6F7 178 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 WFDC6Q9BQY6 131 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 RSG1Q9BU20 258 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 IL36RNQ9UBH0 155 aa12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 COL11A1P12107 1806 aaPredicted RBP12.71□□□□□ -0.38
HNRNPU-226ENST00000640218 VAX1Q5SQQ9 334 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 C16orf92Q96LL3 132 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 HS3ST3B1Q9Y662 390 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 CGB1A6NKQ9 187 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 H0Y980 276 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 CTSBP07858 339 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 ADIPOR1Q96A54 375 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 CTSSP25774 331 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 MMP9P14780 707 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 ZNF345Q14585 488 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 DCAF12L2Q5VW00 463 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 SEC16AO15027 2179 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 MC5RP33032 325 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 ATP1A1-AS1Q5TC04 95 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 GUCD1Q96NT3 240 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 SLC25A33Q9BSK2 321 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 ZDHHC8Q9ULC8 765 aa12.7□□□□□ -0.38
HNRNPU-226ENST00000640218 HOXA6P31267 233 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 STARD6P59095 220 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 SHISA5Q8N114 240 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 RBKSQ9H477 322 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 CKAP5Q14008 2032 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 SCN2AQ99250 2005 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 PIMREGQ9BSJ6 248 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 A0A1W2PRX2 142 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 PLAUP00749 431 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 SLC35B1P78383 322 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 WDFY1Q8IWB7 410 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 DCTN5Q9BTE1 182 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 TCTAP57738 103 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 CALHM1Q8IU99 346 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 H1FOOQ8IZA3 346 aaPredicted RBP12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 OR4C46A6NHA9 309 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 HLA-DQB1P01920 261 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 EBLN2Q6P2I7 272 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 WNT2BQ93097 391 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 A0A087X0M5 115 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 IGLV1-36A0A0B4J1U3 117 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 TRBV5-5A0A0J9YX44 114 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 A0A1B0GX30 115 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 C4orf51C9J302 202 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 FCARP24071 287 aa12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 KIR2DL2P43627 348 aaPredicted RBP12.69□□□□□ -0.38
HNRNPU-226ENST00000640218 LY6EQ16553 131 aa12.68□□□□□ -0.38
HNRNPU-226ENST00000640218 ZNF658BQ4V348 819 aaPredicted RBP12.68□□□□□ -0.38
HNRNPU-226ENST00000640218 OR8G5Q8NG78 346 aa12.68□□□□□ -0.38
HNRNPU-226ENST00000640218 F12P00748 615 aaPredicted RBP12.68□□□□□ -0.38
HNRNPU-226ENST00000640218 COX6A1P12074 109 aa12.68□□□□□ -0.38
HNRNPU-226ENST00000640218 OR10J6PQ8NGY7 276 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms