RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ZNF251Q9BRH9 671 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 GON7Q9BXV9 100 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 PARP12Q9H0J9 701 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 Q9N2K0 584 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 ZFP57Q9NU63 452 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 ZNF107Q9UII5 783 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 IFITM5A6NNB3 132 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 SCTP09683 121 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 ZBTB25P24278 435 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 MRPS15P82914 257 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 PNLIPRP3Q17RR3 467 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 RPL39P5Q59GN2 51 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 UBE2UQ5VVX9 321 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 FAM71F2Q6NXP2 309 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 C18orf65Q6ZTR6 163 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 C8orf86Q6ZUL3 223 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 SPARTQ8N0X7 666 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 KLHL30-AS1Q8NEE0 82 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 EDARADDQ8WWZ3 215 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 RAB3CQ96E17 227 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 ABHD14BQ96IU4 210 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 NECAP2Q9NVZ3 263 aa13.18□□□□□ -0.3
CACNA1A-259ENST00000638114 CD3GP09693 182 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 VDAC1P21796 283 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 GALP22466 123 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 CNTFRP26992 372 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 CEACAM6P40199 344 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 MOGAT2Q3SYC2 334 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 CXorf66Q5JRM2 361 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 FOXB2Q5VYV0 432 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 ETV3LQ6ZN32 361 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 REC114Q7Z4M0 266 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 FCGR1BQ92637 280 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 RCC1LQ96I51 464 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 RITA1Q96K30 269 aa13.17□□□□□ -0.3
CACNA1A-259ENST00000638114 A0A0B4J203 849 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 SMIM30A4D0T7 59 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 TRDCB7Z8K6 153 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 ITGB1BP1O14713 200 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 NBR2O15453 112 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 RPLP1P05386 114 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 GADD45AP24522 165 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 THBS3P49746 956 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 GLDNQ6ZMI3 551 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 ZNF695Q8IW36 515 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 LINC00482Q8N8I6 264 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 YTHDF1Q9BYJ9 559 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 C11orf54Q9H0W9 315 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 KIAA1456Q9P272 454 aa13.16□□□□□ -0.3
CACNA1A-259ENST00000638114 A0A075B6Q4 140 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 CT45A6P0DMU7 189 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 CT45A5P0DMU8 189 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 CT45A7P0DMV0 189 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 RAB6AP20340 208 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 SLC6A1P30531 599 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 FOXE3Q13461 319 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 OR10R2Q8NGX6 335 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 KCTD7Q96MP8 289 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 AGMATQ9BSE5 352 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 GHITMQ9H3K2 345 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 AURKAIP1Q9NWT8 199 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 TXNL4BQ9NX01 149 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 RNF150Q9ULK6 438 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 KCNK7Q9Y2U2 307 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 DNAH3Q8TD57 4116 aa13.15□□□□□ -0.3
CACNA1A-259ENST00000638114 IGKV1-6A0A0C4DH72 117 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 METTL21EPA6NDL7 271 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 OR5H14A6NHG9 310 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 H7C2Y5 167 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 DUS4LO95620 317 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 HLA-DRB1P01911 266 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 IGF1P05019 195 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 ELANEP08246 267 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 FCGR3AP08637 254 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 OR5H8P0DN80 308 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 GNB3P16520 340 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 MYCNOSP40205 109 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 CFHR3Q02985 330 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 NR2C2APQ86WQ0 139 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 NPBQ8NG41 125 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 MRAPQ8TCY5 172 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 DUX3Q96PT4 197 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 PARP11Q9NR21 331 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 STUB1Q9UNE7 303 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 SSR3Q9UNL2 185 aa13.14□□□□□ -0.31
CACNA1A-259ENST00000638114 IGHV7-81A0A0B4J1V7 117 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 H0YJW9 148 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 RAB27BO00194 218 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 MFNGO00587 321 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 BET1O15155 118 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 ATP6V0E1O15342 81 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 FABP7O15540 132 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 NDUFA3O95167 84 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 IGHG4P01861 327 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 GSTP1P09211 210 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms