RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CT45A5P0DMU8 189 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 CT45A7P0DMV0 189 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 SRMP19623 302 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 CRIP2P52943 208 aaPredicted RBP14.32□□□□□ -0.12
CLN6-220ENST00000637450 GABPB1Q06547 395 aaPredicted RBP14.32□□□□□ -0.12
CLN6-220ENST00000637450 UNC119Q13432 240 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 RCN1Q15293 331 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 C19orf54Q5BKX5 351 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 OGFRL1Q5TC84 451 aaPredicted RBP14.32□□□□□ -0.12
CLN6-220ENST00000637450 ZNF660Q6AZW8 331 aaPredicted RBP14.32□□□□□ -0.12
CLN6-220ENST00000637450 SVOPQ8N4V2 548 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 IL1F10Q8WWZ1 152 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 ASCL2Q99929 193 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 NICN1Q9BSH3 213 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 SLC23A1Q9UHI7 598 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 TMEM14DPA8MWL7 114 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 SLC22A1O15245 554 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 QRFPP83859 136 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 NDPQ00604 133 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 RPL39P5Q59GN2 51 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 RBM48Q5RL73 367 aaKnown RBP14.31□□□□□ -0.12
CLN6-220ENST00000637450 FAM131AQ6UXB0 335 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 ZNF429Q86V71 674 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 DCUN1D4Q92564 292 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 TMED9Q9BVK6 235 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 MND1Q9BWT6 205 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 KCNK15Q9H427 330 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 FBXL15Q9H469 300 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 FBXO7Q9Y3I1 522 aa14.31□□□□□ -0.12
CLN6-220ENST00000637450 TRBV6-6A0A0A6YYG2 114 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 ITGB1BP1O14713 200 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 RRHO14718 337 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 SOX15O60248 233 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 CDK1P06493 297 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 EGR2P11161 476 aaPredicted RBP14.3□□□□□ -0.12
CLN6-220ENST00000637450 CX3CL1P78423 397 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 CEACAM19Q7Z692 300 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 AGMATQ9BSE5 352 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 ALX4Q9H161 411 aaPredicted RBP14.3□□□□□ -0.12
CLN6-220ENST00000637450 GHITMQ9H3K2 345 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 RIMS4Q9H426 269 aaPredicted RBP14.3□□□□□ -0.12
CLN6-220ENST00000637450 CHMP1AQ9HD42 196 aaPredicted RBP14.3□□□□□ -0.12
CLN6-220ENST00000637450 PLEKHJ1Q9NW61 149 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 LSM2Q9Y333 95 aaKnown RBP14.3□□□□□ -0.12
CLN6-220ENST00000637450 NUBP2Q9Y5Y2 271 aa14.3□□□□□ -0.12
CLN6-220ENST00000637450 A0A0A6YYD4 124 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 OR5H14A6NHG9 310 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 FCN1O00602 326 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 OVOL1O14753 267 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 CASQ2O14958 399 aaPredicted RBP14.29□□□□□ -0.12
CLN6-220ENST00000637450 MC5RP33032 325 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 SPHARQ15513 63 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 ECSCRQ19T08 205 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 HSD17B12Q53GQ0 312 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 GLDNQ6ZMI3 551 aaPredicted RBP14.29□□□□□ -0.12
CLN6-220ENST00000637450 MOB1BQ7L9L4 216 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 TCTEX1D1Q8N7M0 179 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 DLX4Q92988 240 aaPredicted RBP14.29□□□□□ -0.12
CLN6-220ENST00000637450 TOLLIPQ9H0E2 274 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 PARP12Q9H0J9 701 aaKnown RBP14.29□□□□□ -0.12
CLN6-220ENST00000637450 TPSG1Q9NRR2 321 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 FOXA2Q9Y261 457 aaPredicted RBP14.29□□□□□ -0.12
CLN6-220ENST00000637450 SMAD5-AS1Q9Y6J3 95 aa14.29□□□□□ -0.12
CLN6-220ENST00000637450 A0A1W2PN81 502 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 PTGES3LE9PB15 166 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 LINC01619G3V211 115 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 H0YJW9 148 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 RBBP9O75884 186 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 LY86O95711 162 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 BPNT1O95861 308 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 UCHL1P09936 223 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 CHRNA7P36544 502 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 CD200R1LQ6Q8B3 271 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 OR5AN1Q8NGI8 311 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 OR6M1Q8NGM8 313 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 SETD6Q8TBK2 473 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 SORL1Q92673 2214 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 ABHD14BQ96IU4 210 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 RNF5Q99942 180 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 LPAR5Q9H1C0 372 aa14.28□□□□□ -0.12
CLN6-220ENST00000637450 SOCS1O15524 211 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 GSTP1P09211 210 aaKnown RBP14.27□□□□□ -0.13
CLN6-220ENST00000637450 CEACAM6P40199 344 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 TMEM267Q0VDI3 215 aaPredicted RBP14.27□□□□□ -0.13
CLN6-220ENST00000637450 PLGLAQ15195 96 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 FAM89BQ8N5H3 189 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 CASTOR1Q8WTX7 329 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 C11orf54Q9H0W9 315 aaPredicted RBP14.27□□□□□ -0.13
CLN6-220ENST00000637450 ISYNA1Q9NPH2 558 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 AK3Q9UIJ7 227 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 WASHC3Q9Y3C0 194 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 A3GALT2U3KPV4 340 aa14.27□□□□□ -0.13
CLN6-220ENST00000637450 H7C2Y5 167 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 PROP1O75360 226 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 SAP30O75446 220 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 LGALS1P09382 135 aaKnown RBP14.26□□□□□ -0.13
CLN6-220ENST00000637450 ZBTB25P24278 435 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 SLURP1P55000 103 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 AKIRIN2Q53H80 203 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 ZNF562Q6V9R5 426 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms