RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 POLR1DQ9Y2S0 133 aa3.47□□□□□ -1.85
CHD2-225ENST00000636861 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.47□□□□□ -1.85
CHD2-225ENST00000636861 FCF1Q9Y324 198 aaKnown RBP3.47□□□□□ -1.85
CHD2-225ENST00000636861 R4GMQ9 66 aa3.47□□□□□ -1.85
CHD2-225ENST00000636861 CCDC88CQ9P219 2028 aa3.47□□□□□ -1.85
CHD2-225ENST00000636861 HERC1Q15751 4861 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 A0A0A6YYD5 115 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 TRAV38-1A0A0B4J264 116 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 TRAV34A0A0B4J273 112 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 CTXND1A0A1B0GTU2 59 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 PSMB11A5LHX3 300 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 TMEM14DPA8MWL7 114 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 KLRC4-KLRK1H3BQV0 150 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 H3BRB1 525 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 K7EP34 96 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 P2RY10O00398 339 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 SLC33A1O00400 549 aaPredicted RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 TAX1BP3O14907 124 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 KLK10O43240 276 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 ZNF737O75373 536 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 ZNF324O75467 553 aaPredicted RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 SERF1AO75920 110 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 CLDN7O95471 211 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 C1orf105O95561 183 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 NUDT14O95848 222 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 EFEMP2O95967 443 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 HLA-DQA1P01909 254 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 HBZP02008 142 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 CFIP05156 583 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 GPX1P07203 203 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 HNRNPA1P09651 372 aaKnown RBP eCLIP3.46□□□□□ -1.86
CHD2-225ENST00000636861 LINC00869P0C866 280 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 ZNF728P0DKX0 622 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 CCL2P13500 99 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 NPPBP16860 134 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 AZU1P20160 251 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 PMCHP20382 165 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 CTSSP25774 331 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 NPY1RP25929 384 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 IL12BP29460 328 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 ADMP35318 185 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 PTGER4P35408 488 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 TIMP3P35625 211 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 SPINT3P49223 89 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 RRADP55042 308 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 SNU13P55769 128 aaKnown RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 FOXL2P58012 376 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 ARF3P61204 181 aaPredicted RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 HERV-K104P61576 105 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 DCAF7P61962 342 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 RPS4XP62701 263 aaKnown RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 ARG2P78540 354 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 ZFP36L1Q07352 338 aaKnown RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 HSD52Q0P140 79 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 TMEM249Q2WGJ8 235 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 CD300EQ496F6 205 aaPredicted RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 FFAR4Q5NUL3 377 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 PHYHD1Q5SRE7 291 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 SPATA46Q5T0L3 261 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 MRPL2Q5T653 305 aaKnown RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 C1orf140Q5VVS0 124 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 SP5Q6BEB4 398 aaPredicted RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 AMMECR1LQ6DCA0 310 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 CCDC144NLQ6NUI1 221 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 SLC48A1Q6P1K1 146 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 RASL11AQ6T310 242 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 FAM180AQ6UWF9 173 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 WDR82Q6UXN9 313 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 ZNF765Q7L2R6 523 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 SYT13Q7L8C5 426 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 S100A7AQ86SG5 101 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 CALHM1Q8IU99 346 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 LRRC25Q8N386 305 aaPredicted RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 SCCPDHQ8NBX0 429 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 OR51T1Q8NGJ9 327 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 OR52M1Q8NGK5 317 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 OR5D14Q8NGL3 314 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 OR5C1Q8NGR4 320 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 OR1B1Q8NGR6 318 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 OR1N2Q8NGR9 330 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 OR2AJ1Q8NGZ0 328 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 OR13G1Q8NGZ3 307 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 SCAMP5Q8TAC9 235 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 MRPL30Q8TCC3 161 aaKnown RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 ZNF480Q8WV37 535 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 RNF133Q8WVZ7 376 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 KLK6Q92876 244 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 ZNF681Q96N22 645 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 TNFRSF13CQ96RJ3 184 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 RAB40CQ96S21 281 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 NMNAT3Q96T66 252 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 NICN1Q9BSH3 213 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 LRRC61Q9BV99 259 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 GNB1LQ9BYB4 327 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 LINC00470Q9BZP3 86 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 WDR61Q9GZS3 305 aaKnown RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 MRPL18Q9H0U6 180 aaKnown RBP3.46□□□□□ -1.86
CHD2-225ENST00000636861 GOLGA2P5Q9HBQ8 144 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 MMP25Q9NPA2 562 aa3.46□□□□□ -1.86
CHD2-225ENST00000636861 NRN1Q9NPD7 142 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms