RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 C12orf73Q69YU5 71 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 STX19Q8N4C7 294 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 OR4K15Q8NH41 348 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 MRPS24Q96EL2 167 aaKnown RBP13.55□□□□□ -0.24
CLN6-212ENST00000636020 WDR89Q96FK6 387 aaPredicted RBP13.55□□□□□ -0.24
CLN6-212ENST00000636020 FAM192AQ9GZU8 254 aa13.55□□□□□ -0.24
CLN6-212ENST00000636020 PARP12Q9H0J9 701 aaKnown RBP13.55□□□□□ -0.24
CLN6-212ENST00000636020 SAA2-SAA4A0A096LPE2 208 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 CASQ2O14958 399 aaPredicted RBP13.54□□□□□ -0.24
CLN6-212ENST00000636020 SPRY2O43597 315 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 CDRT1O95170 752 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 SAA2P0DJI9 122 aaPredicted RBP13.54□□□□□ -0.24
CLN6-212ENST00000636020 RCC1P18754 421 aaPredicted RBP13.54□□□□□ -0.24
CLN6-212ENST00000636020 EPHA2P29317 976 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 PPP1CCP36873 323 aaKnown RBP13.54□□□□□ -0.24
CLN6-212ENST00000636020 DEFA5Q01523 94 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 ATP6AP1Q15904 470 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 MPV17LQ2QL34 196 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 Q6ZWC4 215 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 SLC16A13Q7RTY0 426 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 KCTD20Q7Z5Y7 419 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 BVESQ8NE79 360 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 OR52L2PQ8NGH6 319 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 DYNLRB2Q8TF09 96 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 SNAPC3Q92966 411 aa13.54□□□□□ -0.24
CLN6-212ENST00000636020 CPNE2Q96FN4 548 aaPredicted RBP13.54□□□□□ -0.24
CLN6-212ENST00000636020 METTL1Q9UBP6 276 aaKnown RBP13.54□□□□□ -0.24
CLN6-212ENST00000636020 HTR1AP08908 422 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 GSTP1P09211 210 aaKnown RBP13.53□□□□□ -0.24
CLN6-212ENST00000636020 ATP6V1E1P36543 226 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 KIR2DS2P43631 304 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 DAPP51397 102 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 FXYD3Q14802 87 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 TRAT1Q6PIZ9 186 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 GAPTQ8N292 157 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 GRPEL2Q8TAA5 225 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 TINAGL1Q9GZM7 467 aaPredicted RBP13.53□□□□□ -0.24
CLN6-212ENST00000636020 TAF9BQ9HBM6 251 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 IL36GQ9NZH8 169 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 PLA2G2EQ9NZK7 142 aa13.53□□□□□ -0.24
CLN6-212ENST00000636020 ZAR1LA6NP61 321 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 SLC22A1O15245 554 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 CT45A6P0DMU7 189 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 CT45A5P0DMU8 189 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 CT45A7P0DMV0 189 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 ZNF45Q02386 682 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 PSG5Q15238 335 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 ZNF529Q6P280 563 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 C5orf24Q7Z6I8 188 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 AMIGO2Q86SJ2 522 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 OR51A2Q8NGJ7 313 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 NRG4Q8WWG1 115 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 GHSRQ92847 366 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 USMG5Q96IX5 58 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 RNF5Q99942 180 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 METTL9Q9H1A3 318 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 JPT1Q9UK76 154 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 ING4Q9UNL4 249 aa13.52□□□□□ -0.25
CLN6-212ENST00000636020 YPEL1O60688 119 aa13.51□□□□□ -0.25
CLN6-212ENST00000636020 RBBP9O75884 186 aa13.51□□□□□ -0.25
CLN6-212ENST00000636020 RAB3AP20336 220 aa13.51□□□□□ -0.25
CLN6-212ENST00000636020 LY6G6FQ5SQ64 297 aa13.51□□□□□ -0.25
CLN6-212ENST00000636020 FAM71F2Q6NXP2 309 aa13.51□□□□□ -0.25
CLN6-212ENST00000636020 CENPNQ96H22 339 aaPredicted RBP13.51□□□□□ -0.25
CLN6-212ENST00000636020 YPEL2Q96QA6 119 aa13.51□□□□□ -0.25
CLN6-212ENST00000636020 TECRQ9NZ01 308 aaKnown RBP13.51□□□□□ -0.25
CLN6-212ENST00000636020 A0A0B4J203 849 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 OR5H14A6NHG9 310 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 H0YJW9 148 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 BMPR1BO00238 502 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 RBMXL2O75526 392 aaKnown RBP13.5□□□□□ -0.25
CLN6-212ENST00000636020 FOLR2P14207 255 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 EDN2P20800 178 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 MC5RP33032 325 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 SSBP2P81877 361 aaPredicted RBP13.5□□□□□ -0.25
CLN6-212ENST00000636020 DEFB135Q30KP9 77 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 OGFRL1Q5TC84 451 aaPredicted RBP13.5□□□□□ -0.25
CLN6-212ENST00000636020 GLDNQ6ZMI3 551 aaPredicted RBP13.5□□□□□ -0.25
CLN6-212ENST00000636020 PELI1Q96FA3 418 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 IFI27L2Q9H2X8 130 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 WASHC3Q9Y3C0 194 aa13.5□□□□□ -0.25
CLN6-212ENST00000636020 C2orf70A6NJV1 201 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 MCRIP1C9JLW8 97 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 H7C2Y5 167 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 SLC16A6O15403 523 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 SERPINA2P20848 420 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 TMED1Q13445 227 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 OR5AN1Q8NGI8 311 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 NRBF2Q96F24 287 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 SPACA1Q9HBV2 294 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 MBNL3Q9NUK0 354 aaKnown RBP13.49□□□□□ -0.25
CLN6-212ENST00000636020 ENOPH1Q9UHY7 261 aa13.49□□□□□ -0.25
CLN6-212ENST00000636020 A0A1W2PP11 408 aa13.48□□□□□ -0.25
CLN6-212ENST00000636020 HTD2P86397 168 aa13.48□□□□□ -0.25
CLN6-212ENST00000636020 RPL39P5Q59GN2 51 aa13.48□□□□□ -0.25
CLN6-212ENST00000636020 OR52B4Q8NGK2 314 aa13.48□□□□□ -0.25
CLN6-212ENST00000636020 RNF183Q96D59 192 aa13.48□□□□□ -0.25
CLN6-212ENST00000636020 TMEM68Q96MH6 324 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms