RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MRGPRDQ8TDS7 321 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 CXorf58Q96LI9 332 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 SMR3AQ99954 134 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 IFT46Q9NQC8 304 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 ZNF230Q9UIE0 474 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-208ENST00000634934 CR1P17927 2039 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 PPIAL4CA0A0B4J2A2 164 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TEX13DA0A0J9YY54 714 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-208ENST00000634934 B4DSR2 109 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 PPIAL4GP0DN37 164 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TMEM249Q2WGJ8 235 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TMED4Q7Z7H5 227 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 LHFPL1Q86WI0 220 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 GAPTQ8N292 157 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 ZNF565Q8N9K5 539 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 OR13A1Q8NGR1 328 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 TERB2Q8NHR7 220 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 MAFIPQ8WZ33 124 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 ST6GALNAC5Q9BVH7 336 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 RAB18Q9NP72 206 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 OR6C3Q9NZP0 311 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 LPAR3Q9UBY5 353 aa11.91□□□□□ -0.5
LINC00339-208ENST00000634934 FGF16O43320 207 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 ENSAO43768 121 aaKnown RBP11.9□□□□□ -0.5
LINC00339-208ENST00000634934 RLN2P04090 185 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 MSMBP08118 114 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 FCGR3AP08637 254 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 RCC1P18754 421 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-208ENST00000634934 PPP1R1AQ13522 171 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 ZNF273Q14593 569 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 LINC01356Q8N9X3 169 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 C8orf46Q8TAG6 207 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 THAP6Q8TBB0 222 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 PPP1R1CQ8WVI7 109 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 MMP26Q9NRE1 261 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 KCNIP1Q9NZI2 227 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 ONECUT1Q9UBC0 465 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 GPR132Q9UNW8 380 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 LINC00312Q9Y6C7 94 aa11.9□□□□□ -0.5
LINC00339-208ENST00000634934 TRBV6-6A0A0A6YYG2 114 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 IGHV2-70DA0A0C4DH43 119 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 TRIM77I1YAP6 450 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 IFNA6P05013 189 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 LIPFP07098 398 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 IGHV4-31P0DP07 118 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 CCL3L1P16619 93 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 DTYMKP23919 212 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 FPR2P25090 351 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 SMUG1Q53HV7 270 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 Q6ZPA2 131 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 MOB1BQ7L9L4 216 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 TCF23Q7RTU1 214 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 PRR18Q8N4B5 295 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 LY6G5BQ8NDX9 201 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 MSI2Q96DH6 328 aaKnown RBP11.89□□□□□ -0.51
LINC00339-208ENST00000634934 C1orf159Q96HA4 380 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 ARPC5LQ9BPX5 153 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 Q9N2K0 584 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 UBE2J1Q9Y385 318 aaPredicted RBP11.89□□□□□ -0.51
LINC00339-208ENST00000634934 SVEP1Q4LDE5 3571 aa11.89□□□□□ -0.51
LINC00339-208ENST00000634934 DOCK11Q5JSL3 2073 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 A0A1W2PPH5 198 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 TGFAP01135 160 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 CTRB1P17538 263 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 GZMHP20718 246 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 PSMB6P28072 239 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 HRH1P35367 487 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 TAS2R46P59540 309 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 ARF6P62330 175 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 SCGB2B2Q4G0G5 96 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 CTRB2Q6GPI1 263 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 BTNL3Q6UXE8 466 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 GVQW1Q8N7I0 195 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 INO80EQ8NBZ0 244 aaPredicted RBP11.88□□□□□ -0.51
LINC00339-208ENST00000634934 RFESDQ8TAC1 157 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 CORO2AQ92828 525 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 ZNF714Q96N38 554 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 PDCD10Q9BUL8 212 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 TAF9BQ9HBM6 251 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 MBNL3Q9NUK0 354 aaKnown RBP11.88□□□□□ -0.51
LINC00339-208ENST00000634934 POLR3KQ9Y2Y1 108 aaPredicted RBP11.88□□□□□ -0.51
LINC00339-208ENST00000634934 ARHGAP32A7KAX9 2087 aa11.88□□□□□ -0.51
LINC00339-208ENST00000634934 KIR2DS1A0A191URI9 304 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 C12orf77C9JDV5 145 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 SFT2D2O95562 160 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 ZNF728P0DKX0 622 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 SSTR5P35346 364 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 PAX2Q02962 417 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 FAM122CQ6P4D5 195 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 TRAT1Q6PIZ9 186 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 C5orf24Q7Z6I8 188 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 ARL11Q969Q4 196 aa11.87□□□□□ -0.51
LINC00339-208ENST00000634934 GAL3ST2Q9H3Q3 398 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms