RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SERINC4A6NH21 518 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 A6NIN4 97 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM90A8PA6NJQ4 464 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 H0Y8X5 98 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 MOSP00540 346 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM90A13PP0C7W8 464 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM90A24PP0C7X0 464 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TAL1P17542 331 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 OR1E2P47887 323 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 PRDX4Q13162 271 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 P2RY6Q15077 328 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 RGNQ15493 299 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 C4orf26Q17RF5 130 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 LINC00303Q3SY05 128 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF542PQ5EBM4 170 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 AADACL3Q5VUY0 350 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 MFSD12Q6NUT3 480 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF880Q6PDB4 577 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ADAMTSL4Q6UY14 1074 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 C16orf82Q7Z2V1 217 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TP53INP2Q8IXH6 220 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ARHGEF39Q8N4T4 335 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 NPWQ8N729 165 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 OR13H1Q8NG92 308 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 OR10P1Q8NGE3 313 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF417Q8TAU3 575 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 SCGB1C1Q8TD33 95 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 SARAFQ96BY9 339 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 MYEOVQ96EZ4 313 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF587Q96SQ5 575 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 PARLQ9H300 379 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CISD1Q9NZ45 108 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 DUSP13Q9UII6 198 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 MIA3Q5JRA6 1907 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 GBF1Q92538 1859 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CCDC88CQ9P219 2028 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM236DA0A1B0GTK5 79 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 A0A1W2PPI3 338 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TSPAN11A1L157 253 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 MYADML2A6NDP7 307 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 OR51F1A6NGY5 319 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 RENP00797 406 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 HRASP01112 189 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 KRASP01116 189 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 HLA-DQA2P01906 255 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 FGF1P05230 155 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM236CP0DP71 79 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 IFITM1P13164 125 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ACRV1P26436 265 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 LHX2P50458 406 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ACSF3Q4G176 576 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CEACAM19Q7Z692 300 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF429Q86V71 674 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM229BQ8NBD8 167 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 OR5AU1Q8NGC0 362 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 OR5D14Q8NGL3 314 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC25A43Q8WUT9 341 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 APOBEC3DQ96AK3 386 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CACFD1Q9UGQ2 172 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CCNL1Q9UK58 526 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 POLR1DQ9Y2S0 133 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TNRC6AQ8NDV7 1962 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 IFITM10A6NMD0 228 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 USP17L23D6RBM5 183 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 RPL36A-HNRNPH2H7BZ11 118 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CLDN11O75508 207 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 FOLR1P15328 257 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 PPIFP30405 207 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 PSG6Q00889 435 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 VGLL4Q14135 290 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM78Q5T7P6 136 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF322Q6U7Q0 402 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ANKRD33Q7Z3H0 272 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 D2HGDHQ8N465 521 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 ANKRD29Q8N6D5 301 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM178AQ8NBL3 297 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 VN1R2Q8NFZ6 395 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 OR1F12Q8NHA8 337 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CST11Q9H112 138 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 Q9N2J8 555 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 KCNE5Q9UJ90 142 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 MRPS16Q9Y3D3 137 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 COL4A6Q14031 1691 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 GREB1LQ9C091 1923 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TRBV20-1A0A075B6N2 111 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 A0A087WV48 116 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TEX48A0A1B0GUV7 120 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 SHISA3A0PJX4 238 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 FNDC10F2Z333 226 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 SYNGR1O43759 233 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC2A10O95528 541 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 HPNP05981 417 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CXCL8P10145 99 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 NKX2-1P43699 371 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 LCN15Q6UWW0 184 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 GOLT1AQ6ZVE7 132 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC25A26Q70HW3 274 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 CA13Q8N1Q1 262 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 C8orf31Q8N9H6 132 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 RNF149Q8NC42 400 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms