RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 LINC00476Q8WZB0 136 aa11.18□□□□□ -0.62
PNKP-218ENST00000625299 YPEL2Q96QA6 119 aa11.18□□□□□ -0.62
PNKP-218ENST00000625299 SELENOIQ9C0D9 397 aa11.18□□□□□ -0.62
PNKP-218ENST00000625299 METTL1Q9UBP6 276 aaKnown RBP11.18□□□□□ -0.62
PNKP-218ENST00000625299 SHISA3A0PJX4 238 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 IZUMO1RA6ND01 250 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 CA11O75493 328 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 SNRPBP14678 240 aaKnown RBP11.17□□□□□ -0.62
PNKP-218ENST00000625299 CD81P60033 236 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 DEFA5Q01523 94 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 RNLSQ5VYX0 342 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 AWAT2Q6E213 333 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 IL34Q6ZMJ4 242 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 Q8N402 240 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 OR13C5Q8NGS8 318 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 MRPL30Q8TCC3 161 aaKnown RBP11.17□□□□□ -0.62
PNKP-218ENST00000625299 GALMQ96C23 342 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 CENPNQ96H22 339 aaPredicted RBP11.17□□□□□ -0.62
PNKP-218ENST00000625299 THAP7Q9BT49 309 aaPredicted RBP11.17□□□□□ -0.62
PNKP-218ENST00000625299 IFI27L2Q9H2X8 130 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 MBNL3Q9NUK0 354 aaKnown RBP11.17□□□□□ -0.62
PNKP-218ENST00000625299 ADAM30Q9UKF2 790 aa11.17□□□□□ -0.62
PNKP-218ENST00000625299 OR5H14A6NHG9 310 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 CRTAPO75718 401 aaPredicted RBP11.16□□□□□ -0.62
PNKP-218ENST00000625299 SC5DO75845 299 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 BRI3O95415 125 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 BAG2O95816 211 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 HTD2P86397 168 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 KLF5Q13887 457 aaPredicted RBP11.16□□□□□ -0.62
PNKP-218ENST00000625299 C1orf146Q5VVC0 180 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 DMKNQ6E0U4 476 aaPredicted RBP11.16□□□□□ -0.62
PNKP-218ENST00000625299 POC5Q8NA72 575 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 OR5T1Q8NG75 326 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 OR52I1Q8NGK6 324 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 IL1F10Q8WWZ1 152 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 PIPOXQ9P0Z9 390 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 CKLFQ9UBR5 152 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 STEAP1Q9UHE8 339 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 WASHC3Q9Y3C0 194 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 GMPPBQ9Y5P6 360 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 HERC2O95714 4834 aa11.16□□□□□ -0.62
PNKP-218ENST00000625299 A0A0G2JLM5 398 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 H0YJW9 148 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 EI24O14681 340 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 TPPPO94811 219 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 CSN3P07498 182 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 MGMTP16455 207 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 FUT3P21217 361 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 PSG5Q15238 335 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 FAM71F2Q6NXP2 309 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 RPL22L1Q6P5R6 122 aaKnown RBP11.15□□□□□ -0.62
PNKP-218ENST00000625299 ZNF562Q6V9R5 426 aa11.15□□□□□ -0.62
PNKP-218ENST00000625299 TRAV8-7A0A075B6U6 113 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 RAB29O14966 203 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 SLC22A1O15245 554 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 RBBP9O75884 186 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 ALPLP05186 524 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 IGFBP3P17936 291 aaPredicted RBP11.14□□□□□ -0.63
PNKP-218ENST00000625299 MC5RP33032 325 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 FXYD3Q14802 87 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 TATDN3Q17R31 274 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 RPEL1Q2QD12 228 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 C6orf141Q5SZD1 244 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 LINC00322Q6ZN03 302 aaPredicted RBP11.14□□□□□ -0.63
PNKP-218ENST00000625299 ZNF554Q86TJ5 538 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 DDB2Q92466 427 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 FAM46BQ96A09 425 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 ABHD14BQ96IU4 210 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 NEURL2Q9BR09 285 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 WFDC10AQ9H1F0 79 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 ABRACLQ9P1F3 81 aa11.14□□□□□ -0.63
PNKP-218ENST00000625299 A0A1W2PPK0 400 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 FAM90A7PA6NKC0 464 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 FAM90A23PA8MXZ1 464 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 H3BUA1 57 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 PDCD6O75340 191 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 CNIH1O95406 144 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 LIMS3P0CW19 117 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 LIMS4P0CW20 117 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 CPEP16870 476 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 GABRB1P18505 474 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 FSTP19883 344 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 DYRK1AQ13627 763 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 HMGN3Q15651 99 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 MOGAT2Q3SYC2 334 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 CCDC58Q4VC31 144 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 LY6G6FQ5SQ64 297 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 OR2G6Q5TZ20 316 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 SIGIRRQ6IA17 410 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 Q96M66 194 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 Q96MT0 163 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 PARP12Q9H0J9 701 aaKnown RBP11.13□□□□□ -0.63
PNKP-218ENST00000625299 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 SLC2A8Q9NY64 477 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms