RNA–Protein interactions for RNA: ENST00000624930.1

SMG6-IT1-201, SMG6 intronic transcript 1, humanhuman

BASIC

Gene SMG6-IT1, Length 374 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-IT1-201ENST00000624930 CLDN1O95832 211 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 PPP1CCP36873 323 aaKnown RBP8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 PLA2G5P39877 138 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 TMEM33P57088 247 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 HOXA4Q00056 320 aaPredicted RBP8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 LY6DQ14210 128 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 EDDM3AQ14507 147 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 ALKAL2Q6UX46 152 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 MUC15Q8N387 334 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 FGFRL1Q8N441 504 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 OR2C3Q8N628 320 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 ZNF439Q8NDP4 499 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 FAM122AQ96E09 287 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 SAT2Q96F10 170 aaPredicted RBP8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 ADTRPQ96IZ2 230 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 CCL13Q99616 98 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 GAL3ST2Q9H3Q3 398 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 LYRM2Q9NU23 88 aaPredicted RBP8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 SDHAF2Q9NX18 166 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 IDI2-AS1Q9NZ38 188 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 KCNS2Q9ULS6 477 aa8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 RCL1Q9Y2P8 373 aaKnown RBP8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 LSM5Q9Y4Y9 91 aaKnown RBP8.15□□□□□ -1.1
SMG6-IT1-201ENST00000624930 ESPL1Q14674 2120 aa8.15□□□□□ -1.11
SMG6-IT1-201ENST00000624930 DCHS1Q96JQ0 3298 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 ZFHX4Q86UP3 3567 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 BORCS7-ASMTA0A0B4J1R7 106 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 IGHV1-69-2A0A0G2JMI3 117 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 ANKRD34BA5PLL1 514 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TOR1AO14656 332 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 RAB29O14966 203 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 ATXN7O15265 892 aaPredicted RBP8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 SIAH2O43255 324 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TNFSF12O43508 249 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 ZG16O60844 167 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 PROP1O75360 226 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 SCAF4O95104 1147 aaKnown RBP8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 CLDN14O95500 239 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 IGKV1-5P01602 117 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 GYPAP02724 150 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TFF1P04155 84 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 LPAR6P43657 344 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 EDDM3BP56851 147 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 BRWD1-AS2P59051 145 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TAGLNQ01995 201 aaKnown RBP8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 FAM201AQ5SY85 155 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 HEPN1Q6WQI6 88 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 HSD17B13Q7Z5P4 300 aaPredicted RBP8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TPRX1Q8N7U7 411 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 RFESDQ8TAC1 157 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 ZNF596Q8TC21 504 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 RNF141Q8WVD5 230 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 RAB39BQ96DA2 213 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 C5orf30Q96GV9 206 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 SMIM8Q96KF7 97 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 DCTN5Q9BTE1 182 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 GNG12Q9UBI6 72 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 RPUSD1Q9UJJ7 312 aaKnown RBP8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 WSB1Q9Y6I7 421 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 POLEQ07864 2286 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 SVILO95425 2214 aa8.14□□□□□ -1.11
SMG6-IT1-201ENST00000624930 A0A087X0M5 115 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TRBV23-1A0A0A0MS06 115 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 A0A1B0GX30 115 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 MED19A0JLT2 244 aaPredicted RBP8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 NDUFB3O43676 98 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 MED6O75586 246 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 HPRT1P00492 218 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 SEC11BP0C7V7 166 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 DAOP14920 347 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 DUTP33316 252 aaKnown RBP8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 GPR12P47775 334 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 RPL30P62888 115 aaKnown RBP8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 VAMP2P63027 116 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 HFEQ30201 348 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 LRRC10Q5BKY1 277 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 CXorf66Q5JRM2 361 aaPredicted RBP8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TCF23Q7RTU1 214 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 DTX2Q86UW9 622 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 ZGRF1Q86YA3 2104 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 SPAG16Q8N0X2 631 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 STPG2Q8N412 459 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TMEM252Q8N6L7 170 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 DEFB108BQ8NET1 73 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 NEU4Q8WWR8 484 aaPredicted RBP8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 NEUROG1Q92886 237 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 GINS3Q9BRX5 216 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 IFI27L2Q9H2X8 130 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 HEATR1Q9H583 2144 aaKnown RBP8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 CBLN4Q9NTU7 201 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 SLC25A10Q9UBX3 287 aaPredicted RBP8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 PSG11Q9UQ72 335 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 PRELID3BQ9Y3B1 194 aa8.13□□□□□ -1.11
SMG6-IT1-201ENST00000624930 PRRC2CQ9Y520 2896 aaKnown RBP8.12□□□□□ -1.11
SMG6-IT1-201ENST00000624930 A0A0G2JRQ6 117 aa8.12□□□□□ -1.11
SMG6-IT1-201ENST00000624930 MFSD2BA6NFX1 497 aa8.12□□□□□ -1.11
SMG6-IT1-201ENST00000624930 TMPRSS2O15393 492 aa8.12□□□□□ -1.11
SMG6-IT1-201ENST00000624930 SYNGR2O43760 224 aa8.12□□□□□ -1.11
SMG6-IT1-201ENST00000624930 CHST1O43916 411 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms