RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 PHF21AQ96BD5 680 aa11.67□□□□□ -0.54
LINC00643-205ENST00000623219 HSPB9Q9BQS6 159 aa11.67□□□□□ -0.54
LINC00643-205ENST00000623219 GHITMQ9H3K2 345 aa11.67□□□□□ -0.54
LINC00643-205ENST00000623219 Q9N2K0 584 aa11.67□□□□□ -0.54
LINC00643-205ENST00000623219 ZFP57Q9NU63 452 aa11.67□□□□□ -0.54
LINC00643-205ENST00000623219 ZNF580Q9UK33 172 aa11.67□□□□□ -0.54
LINC00643-205ENST00000623219 LINC01548A6NM66 108 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 HSPA12AO43301 675 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 GADD45AP24522 165 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 PSMB9P28065 219 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 FGF9P31371 208 aaPredicted RBP11.66□□□□□ -0.54
LINC00643-205ENST00000623219 ACTBP60709 375 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 MRPS15P82914 257 aaKnown RBP11.66□□□□□ -0.54
LINC00643-205ENST00000623219 PLA2G7Q13093 441 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 TEX38Q6PEX7 206 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 WFDC9Q8NEX5 89 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 RAB3CQ96E17 227 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 ZNF251Q9BRH9 671 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 OR1A1Q9P1Q5 309 aa11.66□□□□□ -0.54
LINC00643-205ENST00000623219 ZNF107Q9UII5 783 aaPredicted RBP11.66□□□□□ -0.54
LINC00643-205ENST00000623219 OR5H14A6NHG9 310 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 NBR2O15453 112 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 DUS4LO95620 317 aaKnown RBP11.65□□□□□ -0.54
LINC00643-205ENST00000623219 SCTP09683 121 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 CD3GP09693 182 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 SLC2A2P11168 524 aaPredicted RBP11.65□□□□□ -0.54
LINC00643-205ENST00000623219 ZNF773Q6PK81 442 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 ETV3LQ6ZN32 361 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 KLHL30-AS1Q8NEE0 82 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 PTX4Q96A99 478 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 RBMXL1Q96E39 390 aaKnown RBP11.65□□□□□ -0.54
LINC00643-205ENST00000623219 RCC1LQ96I51 464 aaKnown RBP11.65□□□□□ -0.54
LINC00643-205ENST00000623219 AGMATQ9BSE5 352 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 PARP12Q9H0J9 701 aaKnown RBP11.65□□□□□ -0.54
LINC00643-205ENST00000623219 STUB1Q9UNE7 303 aa11.65□□□□□ -0.54
LINC00643-205ENST00000623219 NUDT19A8MXV4 375 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 MFNGO00587 321 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 NDUFA3O95167 84 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 HLA-DRB1P01911 266 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 IGF1P05019 195 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 FCGR3AP08637 254 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 VDAC1P21796 283 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 CEACAM6P40199 344 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 CFHR3Q02985 330 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 FOXE3Q13461 319 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 PNLIPRP3Q17RR3 467 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 MOGAT2Q3SYC2 334 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 RPL39P5Q59GN2 51 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 CXorf66Q5JRM2 361 aaPredicted RBP11.64□□□□□ -0.55
LINC00643-205ENST00000623219 FAM131AQ6UXB0 335 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 NR2C2APQ86WQ0 139 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 LINC00482Q8N8I6 264 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 RNF152Q8N8N0 203 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 OR4A4PQ8NGN8 299 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 OR10R2Q8NGX6 335 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 ABHD14BQ96IU4 210 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 NECAP2Q9NVZ3 263 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 TXNL4BQ9NX01 149 aaKnown RBP11.64□□□□□ -0.55
LINC00643-205ENST00000623219 KIAA1456Q9P272 454 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 KCNK7Q9Y2U2 307 aa11.64□□□□□ -0.55
LINC00643-205ENST00000623219 IGKV1-6A0A0C4DH72 117 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 METTL21EPA6NDL7 271 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 TRDCB7Z8K6 153 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 RAB27BO00194 218 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 DIRAS3O95661 229 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 ELANEP08246 267 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 OR5H8P0DN80 308 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 IGLL1P15814 213 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 HIST1H1DP16402 221 aaKnown RBP11.63□□□□□ -0.55
LINC00643-205ENST00000623219 CNTFRP26992 372 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 SERPINB10P48595 397 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 THBS3P49746 956 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 KIR2DS1Q14954 304 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 C5orf64Q2M2E5 130 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 C8orf86Q6ZUL3 223 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 NPBQ8NG41 125 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 CHCHD6Q9BRQ6 235 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 CABLES2Q9BTV7 478 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 C11orf54Q9H0W9 315 aaPredicted RBP11.63□□□□□ -0.55
LINC00643-205ENST00000623219 SSR3Q9UNL2 185 aa11.63□□□□□ -0.55
LINC00643-205ENST00000623219 A0A0B4J203 849 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 NOTOA8MTQ0 251 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 H0YJW9 148 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 FABP7O15540 132 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 IGHG4P01861 327 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 CT45A6P0DMU7 189 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 CT45A5P0DMU8 189 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 CT45A7P0DMV0 189 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 GNB3P16520 340 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 MC5RP33032 325 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 ARL6IP1Q15041 203 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 FOXB2Q5VYV0 432 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 C18orf65Q6ZTR6 163 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 TPRA1Q86W33 373 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 ZNF695Q8IW36 515 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 OR5AN1Q8NGI8 311 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 GPR61Q9BZJ8 451 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 TOLLIPQ9H0E2 274 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 ZNF221Q9UK13 617 aa11.62□□□□□ -0.55
LINC00643-205ENST00000623219 WASHC3Q9Y3C0 194 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms