RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 TRDCB7Z8K6 153 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 FABP7O15540 132 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 GSTT2P0CG29 244 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 TRAPPC2P0DI81 140 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 TRAPPC2BP0DI82 140 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 GLP1RP43220 463 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 HLA-DRB3P79483 266 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 PAX5Q02548 391 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 LY6EQ16553 131 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 C1orf122Q6ZSJ8 110 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 LHFPL1Q86WI0 220 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 OR5D13Q8NGL4 314 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 OR6F1Q8NGZ6 308 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 CCDC107Q8WV48 283 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 SDSLQ96GA7 329 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 SNX22Q96L94 193 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 SCGB3A2Q96PL1 93 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 ING3Q9NXR8 418 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 TRAPPC2LQ9UL33 140 aa13.08□□□□□ -0.31
CD40-207ENST00000620709 VWFP04275 2813 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 TRBV23-1A0A0A0MS06 115 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 H3BUX3 64 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 ZNF737O75373 536 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 IL5P05113 134 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 CTXN2P0C2S0 81 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 ANXA7P20073 488 aaKnown RBP13.08□□□□□ -0.32
CD40-207ENST00000620709 ECI1P42126 302 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 ZNF561Q8N587 486 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 C17orf50Q8WW18 174 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 MRGPRFQ96AM1 343 aa13.08□□□□□ -0.32
CD40-207ENST00000620709 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
CD40-207ENST00000620709 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
CD40-207ENST00000620709 MGST3O14880 152 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 COX7A1P24310 79 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 PAX6P26367 422 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 PROK1P58294 105 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 RPL31P62899 125 aaKnown RBP13.07□□□□□ -0.32
CD40-207ENST00000620709 GLDNQ6ZMI3 551 aaPredicted RBP13.07□□□□□ -0.32
CD40-207ENST00000620709 OR4A4PQ8NGN8 299 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 OR5R1Q8NH85 324 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 COQ2Q96H96 371 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 SSX3Q99909 188 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 ALX4Q9H161 411 aaPredicted RBP13.07□□□□□ -0.32
CD40-207ENST00000620709 GHITMQ9H3K2 345 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 MBNL3Q9NUK0 354 aaKnown RBP13.07□□□□□ -0.32
CD40-207ENST00000620709 VSIG4Q9Y279 399 aa13.07□□□□□ -0.32
CD40-207ENST00000620709 A0A1W2PPH5 198 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 HMX3A6NHT5 357 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 K7N7A8 449 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 SCTP09683 121 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 RCC1P18754 421 aaPredicted RBP13.06□□□□□ -0.32
CD40-207ENST00000620709 CBX3Q13185 183 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 SURF2Q15527 256 aaPredicted RBP13.06□□□□□ -0.32
CD40-207ENST00000620709 KRBOX4Q5JUW0 171 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 AADACL3Q5VUY0 350 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 TMEM200BQ69YZ2 307 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 ZNF660Q6AZW8 331 aaPredicted RBP13.06□□□□□ -0.32
CD40-207ENST00000620709 DHRS11Q6UWP2 260 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 TMED4Q7Z7H5 227 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 MARCH1Q8TCQ1 289 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 NEURL2Q9BR09 285 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 CABLES2Q9BTV7 478 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 OR51J1Q9H342 316 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 C16orf95Q9H693 158 aa13.06□□□□□ -0.32
CD40-207ENST00000620709 WNK1Q9H4A3 2382 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 MEX3AA1L020 520 aaKnown RBP13.05□□□□□ -0.32
CD40-207ENST00000620709 OR5H14A6NHG9 310 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 TK1P04183 234 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 VSIG10L2P0DP72 767 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 CCL3L1P16619 93 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 FCGR2CP31995 323 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 ERVFRD-1P60508 538 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 RRAS2P62070 204 aaPredicted RBP13.05□□□□□ -0.32
CD40-207ENST00000620709 AESQ08117 197 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 HMGN3Q15651 99 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 IGSF11Q5DX21 431 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 HCP5Q6MZN7 132 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 AKAP14Q86UN6 197 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 BEND2Q8NDZ0 799 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 PPP1R14BQ96C90 147 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 FAM234AQ9H0X4 552 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 KCNIP1Q9NZI2 227 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 KIF25Q9UIL4 384 aa13.05□□□□□ -0.32
CD40-207ENST00000620709 MEIKINA0A087WXM9 373 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 SNRPGP15A8MWD9 76 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 CREBL2O60519 120 aaPredicted RBP13.04□□□□□ -0.32
CD40-207ENST00000620709 PGAM2P15259 253 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 LGALS4P56470 323 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 TAS2R31P59538 309 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 HERV-K104P61576 105 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 EDDM3AQ14507 147 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 HERPUD1Q15011 391 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 PDLIM3Q53GG5 364 aaPredicted RBP13.04□□□□□ -0.32
CD40-207ENST00000620709 C6orf183Q5T699 404 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 TRAT1Q6PIZ9 186 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 FAM110DQ8TAY7 271 aaPredicted RBP13.04□□□□□ -0.32
CD40-207ENST00000620709 SEC22CQ9BRL7 303 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 MED28Q9H204 178 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 GPR132Q9UNW8 380 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms