RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 APOFQ13790 326 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 MAPK14Q16539 360 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 TMEM176BQ3YBM2 270 aaPredicted RBP1.21□□□□□ -2.22
TARDBP-220ENST00000618606 CLVS2Q5SYC1 327 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 SYPL2Q5VXT5 272 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 ZNF660Q6AZW8 331 aaPredicted RBP1.21□□□□□ -2.22
TARDBP-220ENST00000618606 SFXN4Q6P4A7 337 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 TNFAIP8L2Q6P589 184 aaPredicted RBP1.21□□□□□ -2.22
TARDBP-220ENST00000618606 SCGB1D4Q6XE38 83 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 NT5DC3Q86UY8 548 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 PACRGLQ8N7B6 248 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 FER1L6-AS1Q8NA97 138 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 OR1M1Q8NGA1 313 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 OR7D2Q96RA2 312 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 PAIP2Q9BPZ3 127 aaKnown RBP1.21□□□□□ -2.22
TARDBP-220ENST00000618606 TMEM109Q9BVC6 243 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 MRPS26Q9BYN8 205 aaKnown RBP1.21□□□□□ -2.22
TARDBP-220ENST00000618606 MED28Q9H204 178 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 OR51B6Q9H340 312 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 UBQLN4Q9NRR5 601 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 RPUSD1Q9UJJ7 312 aaKnown RBP1.21□□□□□ -2.22
TARDBP-220ENST00000618606 POLR1DQ9Y2S0 133 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 MRPS16Q9Y3D3 137 aaKnown RBP1.21□□□□□ -2.22
TARDBP-220ENST00000618606 LINC00588Q9Y4M8 146 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 NPATQ14207 1427 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 C9orf84Q5VXU9 1444 aa1.21□□□□□ -2.22
TARDBP-220ENST00000618606 BAZ2AQ9UIF9 1905 aaKnown RBP1.21□□□□□ -2.22
TARDBP-220ENST00000618606 IGKV1D-37A0A075B6S9 117 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 IGHV3OR15-7A0A075B7D8 119 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 TEX50A0A1B0GTY4 177 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 A0A1W2PQL4 384 aaPredicted RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 TMEM210A6NLX4 147 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 M0R036 132 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 M0R381 172 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 COPEO14579 308 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 LECT2O14960 151 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 ACOX3O15254 700 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 EEF1E1O43324 174 aaKnown RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 IGHMP01871 453 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 TNNC2P02585 160 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 GYPCP04921 128 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 IFNA16P05015 189 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 GUSBP08236 651 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 CTXN2P0C2S0 81 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 CDK2P24941 298 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 CRABP2P29373 138 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 MAP2K4P45985 399 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 CEBPGP53567 150 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 NAA20P61599 178 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 RANP62826 216 aaKnown RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 RPS24P62847 133 aaKnown RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 HLA-DRB3P79483 266 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 FABP5Q01469 135 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 AESQ08117 197 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 PRDX4Q13162 271 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 STX5Q13190 355 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 PDK2Q15119 407 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 SLC9A3R2Q15599 337 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 UAP1Q16222 522 aaPredicted RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 KRTAP25-1Q3LHN0 102 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 TMEM31Q5JXX7 168 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 C1orf194Q5T5A4 169 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 PRR9Q5T870 116 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 SPINT4Q6UDR6 99 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 C1orf174Q8IYL3 243 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 LRRC34Q8IZ02 419 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 NATD1Q8N6N6 113 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 OR2T4Q8NH00 348 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 OR51H1Q8NH63 302 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 MFSD8Q8NHS3 518 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 Q8WTZ3 238 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 ASB17Q8WXJ9 295 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 YIPF5Q969M3 257 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 RMI2Q96E14 147 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 CHMP6Q96FZ7 201 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 ABHD14BQ96IU4 210 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 TRIB3Q96RU7 358 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 STACQ99469 402 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 MED18Q9BUE0 208 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 C1orf50Q9BV19 199 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 CCDC94Q9BW85 323 aaPredicted RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 LRRC19Q9H756 370 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 TRIM45Q9H8W5 580 aaPredicted RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 PSTPIP2Q9H939 334 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 DNAJC12Q9UKB3 198 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 CARHSP1Q9Y2V2 147 aaKnown RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 WASHC3Q9Y3C0 194 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 PCYT1BQ9Y5K3 369 aaPredicted RBP1.2□□□□□ -2.22
TARDBP-220ENST00000618606 TRAPPC1Q9Y5R8 145 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 KIF15Q9NS87 1388 aa1.2□□□□□ -2.22
TARDBP-220ENST00000618606 TRAV8-1A0A0A6YYK1 113 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 C5orf49A4QMS7 147 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 SMIM23A6NLE4 172 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 TMEM114B3SHH9 223 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 H3BSA7 217 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 SLC25A20O43772 301 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 SH2D1AO60880 128 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 DEDDO75618 318 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 STK16O75716 305 aa1.19□□□□□ -2.22
TARDBP-220ENST00000618606 RPP14O95059 124 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms