RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 ICAM4Q14773 271 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 C1orf194Q5T5A4 169 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 SPSB3Q6PJ21 355 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 SLC35E3Q7Z769 313 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 ZDHHC23Q8IYP9 409 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 MRPL24Q96A35 216 aaKnown RBP9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 WFIKKN1Q96NZ8 548 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 SCGB3A2Q96PL1 93 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 TAAR6Q96RI8 345 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 CABLES2Q9BTV7 478 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 ELOVL1Q9BW60 279 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 ZNF442Q9H7R0 627 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 CDH20Q9HBT6 801 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 CLCF1Q9UBD9 225 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 MSRB2Q9Y3D2 182 aa9.7□□□□□ -0.86
PCDHGA9-202ENST00000616887 DIRAS3O95661 229 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 ELLP55199 621 aaPredicted RBP9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 FOXF2Q12947 444 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 MALLQ13021 153 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 C1orf123Q9NWV4 160 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 GAB2Q9UQC2 676 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 POLR3KQ9Y2Y1 108 aaPredicted RBP9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 CHTOPQ9Y3Y2 248 aaKnown RBP9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 APC2O95996 2303 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 RRP8O43159 456 aaKnown RBP9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 RHBDL1O75783 438 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 CA6P23280 308 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 BRS3P32247 399 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 ARR3P36575 388 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 TFPI2P48307 235 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 ALKBH6Q3KRA9 238 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 SP6Q3SY56 376 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 C9orf106Q8NAJ2 232 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 OR10A7Q8NGE5 316 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 C22orf15Q8WYQ4 148 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 E5RGE8 158 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 PDCD6O75340 191 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 IFNA21P01568 189 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 MMP9P14780 707 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 CEACAM21Q3KPI0 293 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 OR2G3Q8NGZ4 309 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 DNAJC4Q9NNZ3 241 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 VAX2Q9UIW0 290 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 TUBD1Q9UJT1 453 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 NSG2Q9Y328 171 aa9.69□□□□□ -0.86
PCDHGA9-202ENST00000616887 ESPL1Q14674 2120 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 K7EM74 188 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 AGFG2O95081 481 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 RND2P52198 227 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 TLE4Q04727 773 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 WDR25Q64LD2 544 aaPredicted RBP9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 OR11L1Q8NGX0 322 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 GMPPAQ96IJ6 420 aaPredicted RBP9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 GPHA2Q96T91 129 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 GLRX2Q9NS18 164 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 IL36GQ9NZH8 169 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 TRBV24-1A0A075B6N3 115 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 GPR137BO60478 399 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 CNOT4O95628 575 aaKnown RBP9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 IGHG3P01860 377 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 TUBG1P23258 451 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 RPL23AP62750 156 aaKnown RBP9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 PHLDA2Q53GA4 152 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 ZNF66Q6ZN08 573 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 TMEM18Q96B42 140 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 OR2J1Q9GZK6 312 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 FKBP11Q9NYL4 201 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 KIAA1456Q9P272 454 aa9.68□□□□□ -0.86
PCDHGA9-202ENST00000616887 CHD3Q12873 2000 aaKnown RBP9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 KIR2DL5BA0A0G2JN68 375 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 KIR2DL5BA0A0G2JPC4 375 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 B4DEV8 164 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 HPRT1P00492 218 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 HSPB1P04792 205 aaKnown RBP9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 CD55P08174 381 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 VAMP2P63027 116 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 IGFL2Q6UWQ7 119 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 WDR86Q86TI4 376 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 KIR2DL5AQ8N109 375 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 EXTL1Q92935 676 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 INTS1Q8N201 2190 aaKnown RBP9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 KIR2DL2P43627 348 aaPredicted RBP9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 PIGPP57054 158 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 RAB11AP62491 216 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 ARL6IP1Q15041 203 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 FAM214BQ7L5A3 538 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 RPRMLQ8N4K4 120 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 C11orf42Q8N5U0 333 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 TMEM37Q8WXS4 190 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 OR5P3Q8WZ94 311 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 GP6Q9HCN6 339 aa9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 C14orf166Q9Y224 244 aaKnown RBP9.67□□□□□ -0.86
PCDHGA9-202ENST00000616887 TRAV17A0A0B4J275 112 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 A0A1B0GU03 582 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 ZNF705FA8MVS1 300 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 SMPD2O60906 423 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 CYB5R3P00387 301 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 ZNF705DP0CH99 300 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 ZNF705BP0CI00 300 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms