RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 HSD52Q0P140 79 aa8.17□□□□□ -1.1
COL12A1-211ENST00000615798 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
COL12A1-211ENST00000615798 OSR2Q8N2R0 312 aa8.17□□□□□ -1.1
COL12A1-211ENST00000615798 P2RX4Q99571 388 aa8.17□□□□□ -1.1
COL12A1-211ENST00000615798 WNT10AQ9GZT5 417 aa8.17□□□□□ -1.1
COL12A1-211ENST00000615798 ZNF788Q6ZQV5 615 aa8.17□□□□□ -1.1
COL12A1-211ENST00000615798 ZNF107Q9UII5 783 aaPredicted RBP8.17□□□□□ -1.1
COL12A1-211ENST00000615798 TRAV8-6A0A0B4J262 113 aa8.17□□□□□ -1.1
COL12A1-211ENST00000615798 ZNF585BQ52M93 769 aa8.17□□□□□ -1.1
COL12A1-211ENST00000615798 NXT2Q9NPJ8 142 aaKnown RBP8.17□□□□□ -1.1
COL12A1-211ENST00000615798 TMEFF2Q9UIK5 374 aaPredicted RBP8.17□□□□□ -1.1
COL12A1-211ENST00000615798 OR1N1Q8NGS0 311 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 TCTN3Q6NUS6 607 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 LINC00696Q6ZRV3 163 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 KLK11Q9UBX7 282 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 TRGV10A0A0A0MS01 117 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 C17orf51A8MQB3 221 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 DPM2O94777 84 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 POLR2IP36954 125 aaKnown RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 Q8IYB0 196 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 TMEM99Q8N816 258 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 ZG16BQ96DA0 208 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 C6orf106Q9H6K1 298 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 EPDR1Q9UM22 224 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 RGPD3A6NKT7 1758 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 GAPDHP04406 335 aaKnown RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 C10orf113Q5VZT2 155 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 H1FNTQ75WM6 255 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 ZNF511Q8NB15 262 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 ISG20L2Q9H9L3 353 aaKnown RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 WBP2Q969T9 261 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 TRAV9-2A0A087WT02 112 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 ACRP10323 421 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 CNTFRP26992 372 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 SLCO1C1Q9NYB5 712 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 EXPH5Q8NEV8 1989 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 EP300Q09472 2414 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 MDKP21741 143 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 PLSCR2Q9NRY7 297 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 NHP2Q9NX24 153 aaKnown RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 CFDP00746 253 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 ST6GALNAC6Q969X2 333 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 IFI6P09912 130 aa8.16□□□□□ -1.1
COL12A1-211ENST00000615798 ZNF296Q8WUU4 475 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-211ENST00000615798 A0A1B0GWA3 101 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 FOLR3P41439 243 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 LPAR6P43657 344 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 C12orf73Q69YU5 71 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 DSCR3O14972 297 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 ZFAND5O76080 213 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 ICAM2P13598 275 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 RAC3P60763 192 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 WDR54Q9H977 334 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 NEU3Q9UQ49 428 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 ST3GAL6Q9Y274 331 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 LANCL1O43813 399 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 C2orf83Q53S99 150 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 IBA57Q5T440 356 aaKnown RBP8.15□□□□□ -1.1
COL12A1-211ENST00000615798 KIR2DL4Q99706 377 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 GAGE12JA6NER3 117 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 GAGE1Q13065 139 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 GAGE4Q13068 117 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 GAGE5Q13069 117 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 GAGE6Q13070 117 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 HIST1H2BAQ96A08 127 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 TMED7Q9Y3B3 224 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 RALGAPA2Q2PPJ7 1873 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 VSIG4Q9Y279 399 aa8.15□□□□□ -1.1
COL12A1-211ENST00000615798 COL11A2P13942 1736 aaPredicted RBP8.15□□□□□ -1.11
COL12A1-211ENST00000615798 K7ESF4 209 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 CDIPTO14735 213 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 RTP5Q14D33 572 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 OTPQ5XKR4 325 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 ZNF683Q8IZ20 524 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 C11orf40Q8WZ69 217 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.11
COL12A1-211ENST00000615798 SUMO2P61956 95 aaKnown RBP8.15□□□□□ -1.11
COL12A1-211ENST00000615798 SP6Q3SY56 376 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 ZNF479Q96JC4 524 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 CCL27Q9Y4X3 112 aa8.15□□□□□ -1.11
COL12A1-211ENST00000615798 TMED7-TICAM2A0A0A6YYA0 188 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 H0YIG0 161 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 ASPHD2Q6ICH7 369 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 OR52M1Q8NGK5 317 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 DYNLRB2Q8TF09 96 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 DAPP1Q9UN19 280 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 A0A0G2JLM5 398 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 MLNRO43193 412 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 IGFBP4P22692 258 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 ID1P41134 155 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 SOX8P57073 446 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 VAX1Q5SQQ9 334 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 NT5CQ8TCD5 201 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 PAXXQ9BUH6 204 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 A6NNC1 897 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 FUT3P21217 361 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 BHLHA9Q7RTU4 235 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 PP6455Q8WZ26 134 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 SLC6A13Q9NSD5 602 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms