RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 TAS2R46P59540 309 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 SSBP1Q04837 148 aaKnown RBP10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 BAMBIQ13145 260 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 SSX2Q16385 188 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 CT45A1Q5HYN5 189 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 UTF1Q5T230 341 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 FAM71F2Q6NXP2 309 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 CT45A3Q8NHU0 189 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 TOMM40LQ969M1 308 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 THAP7Q9BT49 309 aaPredicted RBP10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 NECAP2Q9NVZ3 263 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 RDH8Q9NYR8 311 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 PIPOXQ9P0Z9 390 aa10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 SOX21Q9Y651 276 aaPredicted RBP10.5□□□□□ -0.73
SRGAP2C-204ENST00000613462 IGKV1D-8A0A087WSZ0 117 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 A0A1W2PPE3 182 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 DNAJC9-AS1A6NH13 148 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 CSF1P09603 554 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 IL7P13232 177 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 NAT1P18440 290 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 BRS3P32247 399 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 IER3P46695 156 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZNF134P52741 427 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 DEFA1P59665 94 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 DEFA3P59666 94 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZNF816Q0VGE8 651 aaPredicted RBP10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 IGSF11Q5DX21 431 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 LDLRAD2Q5SZI1 272 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 OR8H3Q8N146 312 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 LYG1Q8N1E2 194 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 TOMM5Q8N4H5 51 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 GVQW1Q8N7I0 195 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZFAND2BQ8WV99 257 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 C17orf50Q8WW18 174 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 PALMDQ9NP74 551 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 TAS2R8Q9NYW2 309 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 OR1A1Q9P1Q5 309 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZNF107Q9UII5 783 aaPredicted RBP10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 HILPDAQ9Y5L2 63 aa10.49□□□□□ -0.73
SRGAP2C-204ENST00000613462 LINC00854A0A1B0GVQ3 168 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 TRIM77I1YAP6 450 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 HSD17B6O14756 317 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 RAB29O14966 203 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 SLC31A2O15432 143 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 HOXA3O43365 443 aaPredicted RBP10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 GAPDHP04406 335 aaKnown RBP10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 FCER2P06734 321 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 TBPP20226 339 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 FAUP35544 74 aaKnown RBP10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 ACTBL2Q562R1 376 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 LIAT1Q6ZQX7 453 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 C5orf24Q7Z6I8 188 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 H1FOOQ8IZA3 346 aaPredicted RBP10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 OR5AP2Q8NGF4 316 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 SNAPC3Q92966 411 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 ST6GALNAC6Q969X2 333 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 S1PR3Q99500 378 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 SSX3Q99909 188 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 IFI27L2Q9H2X8 130 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 MTFP1Q9UDX5 166 aa10.48□□□□□ -0.73
SRGAP2C-204ENST00000613462 CENPXA8MT69 81 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 LANCL1O43813 399 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 IGHV4-59P01825 116 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 RNASE1P07998 156 aaKnown RBP10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 TAS2R19P59542 299 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 RPL15P61313 204 aaKnown RBP10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 CDK10Q15131 360 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 SLC9A3R2Q15599 337 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 BAK1Q16611 211 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 FAM53AQ6NSI3 398 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZNF833PQ6ZTB9 187 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 TGIF2LXQ8IUE1 241 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 DYNAPQ8N1N2 210 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZDHHC22Q8N966 263 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 OR5H2Q8NGV7 314 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 RTN4IP1Q8WWV3 396 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 TRIM63Q969Q1 353 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 SDHCQ99643 169 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 AGMATQ9BSE5 352 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 C11orf54Q9H0W9 315 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 RAB18Q9NP72 206 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 KLK11Q9UBX7 282 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZNF221Q9UK13 617 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 PITPNC1Q9UKF7 332 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 VPREB3Q9UKI3 123 aa10.47□□□□□ -0.73
SRGAP2C-204ENST00000613462 SAA2-SAA4A0A096LPE2 208 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 A0A1W2PPI3 338 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 ZNF736B4DX44 427 aaPredicted RBP10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 H3BUX3 64 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 SLC22A5O76082 557 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 AKAIN1P0CW23 69 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 SAA2P0DJI9 122 aaPredicted RBP10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 OR5H8P0DN80 308 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 OR3A3P47888 321 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 UBA52P62987 128 aaKnown RBP10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 HABP2Q14520 560 aaPredicted RBP10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 MZT2BQ6NZ67 158 aa10.46□□□□□ -0.73
SRGAP2C-204ENST00000613462 ODF3L1Q8IXM7 274 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms