RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 UBE2CO00762 179 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 SMPD2O60906 423 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 TNFSF13O75888 250 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 NXPH3O95157 252 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 OR2H2O95918 312 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 HSPB1P04792 205 aaKnown RBP12.39□□□□□ -0.43
CDH1-213ENST00000612417 DAOP14920 347 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 ZNF146Q15072 292 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 ZNF506Q5JVG8 444 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 SPATA46Q5T0L3 261 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 RPRMLQ8N4K4 120 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 Q8NA96 180 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 SCCPDHQ8NBX0 429 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 FAM57AQ8TBR7 257 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 IL1F10Q8WWZ1 152 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 YPEL4Q96NS1 127 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 FAM215AQ9Y5M1 114 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 SRP19P09132 144 aaKnown RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 PGA5P0DJD9 388 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 IDH3GP51553 393 aaPredicted RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 SNRPEP62304 92 aaKnown RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 MRPL49Q13405 166 aaKnown RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 EIF2S3LQ2VIR3 472 aaKnown RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 Q6ZRM9 215 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 WIPI2Q9Y4P8 454 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 PRR14LQ5THK1 2151 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 SCAF4O95104 1147 aaKnown RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 CELA3BP08861 270 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 RAB2AP61019 212 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 PPP1CBP62140 327 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 ICAM4Q14773 271 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 KRBOX4Q5JUW0 171 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 CXorf67Q86X51 503 aaPredicted RBP12.38□□□□□ -0.43
CDH1-213ENST00000612417 CLDND2Q8NHS1 167 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 CACNG5Q9UF02 275 aa12.38□□□□□ -0.43
CDH1-213ENST00000612417 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 SYNGR2O43760 224 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH1-213ENST00000612417 IFNA5P01569 189 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 IGKV1-5P01602 117 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 ACAA1P09110 424 aaPredicted RBP12.37□□□□□ -0.43
CDH1-213ENST00000612417 RAC2P15153 192 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 MYPOPQ86VE0 399 aaPredicted RBP12.37□□□□□ -0.43
CDH1-213ENST00000612417 C1QL4Q86Z23 238 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 NANPQ8TBE9 248 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 CDH20Q9HBT6 801 aa12.37□□□□□ -0.43
CDH1-213ENST00000612417 PUS1Q9Y606 427 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH1-213ENST00000612417 HEATR1Q9H583 2144 aaKnown RBP12.37□□□□□ -0.43
CDH1-213ENST00000612417 TLN1Q9Y490 2541 aaKnown RBP12.36□□□□□ -0.43
CDH1-213ENST00000612417 A0A087WWC5 75 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 IQCF6A8MYZ5 107 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 SIRPB1O00241 398 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 PRRG2O14669 202 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 AGFG2O95081 481 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 CGAP01215 116 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 ARG1P05089 322 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 OR8U8P0C7N1 319 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 COX5AP20674 150 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 ZNF585BQ52M93 769 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 KHDC3LQ587J8 217 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 GFRALQ6UXV0 394 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 FAM24BQ8N5W8 94 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 RNASE11Q8TAA1 199 aaKnown RBP12.36□□□□□ -0.43
CDH1-213ENST00000612417 PSMG3Q9BT73 122 aaPredicted RBP12.36□□□□□ -0.43
CDH1-213ENST00000612417 OR2J1Q9GZK6 312 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 METTL1Q9UBP6 276 aaKnown RBP12.36□□□□□ -0.43
CDH1-213ENST00000612417 TRAPPC2LQ9UL33 140 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 KIAA2026Q5HYC2 2103 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 hCG_1809904A0A1W2PP81 198 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 A0A1W2PR64 198 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 A0A1W2PRV1 198 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 TMEM210A6NLX4 147 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 H3BQ15 152 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 SH2D1BO14796 132 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 RAB4BP61018 213 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 HAGHQ16775 308 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 C1orf162Q8NEQ5 155 aaPredicted RBP12.36□□□□□ -0.43
CDH1-213ENST00000612417 RNF150Q9ULK6 438 aa12.36□□□□□ -0.43
CDH1-213ENST00000612417 C1QTNF9BB2RNN3 333 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 FAM90A26D6RGX4 464 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 H3BP45 60 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 OR2C1O95371 312 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 IGHV2-5P01817 119 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 TIMP3P35625 211 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 TDGF1P3P51864 188 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 TMEM267Q0VDI3 215 aaPredicted RBP12.35□□□□□ -0.43
CDH1-213ENST00000612417 P2RY6Q15077 328 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 IGFBP7Q16270 282 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 IZUMO4Q1ZYL8 232 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 BHLHA15Q7RTS1 189 aaPredicted RBP12.35□□□□□ -0.43
CDH1-213ENST00000612417 THNSL2Q86YJ6 484 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
CDH1-213ENST00000612417 TCEAL7Q9BRU2 100 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 PARD6GQ9BYG4 376 aaPredicted RBP12.35□□□□□ -0.43
CDH1-213ENST00000612417 HES4Q9HCC6 221 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 PPP1R3CQ9UQK1 317 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms