RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 PPP1R3CQ9UQK1 317 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 SYNGR4O95473 234 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 GFRA1P56159 465 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 Q6P435 159 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 ZNF497Q6ZNH5 498 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 GBGT1Q8N5D6 347 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 SAP25Q8TEE9 199 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 PRO3102Q9H379 93 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 CHODLQ9H9P2 273 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 A0A1W2PPQ1 181 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 J3QT63 122 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 CLDN1O95832 211 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 CNN1P51911 297 aaKnown RBP18.91■□□□□ 0.62
SHANK2-220ENST00000608988 VWC2Q2TAL6 325 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 WIPI1Q5MNZ9 446 aaPredicted RBP18.91■□□□□ 0.62
SHANK2-220ENST00000608988 TGIF2LXQ8IUE1 241 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 Q8IYB0 196 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 IL1F10Q8WWZ1 152 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 ZNF552Q9H707 407 aaPredicted RBP18.91■□□□□ 0.62
SHANK2-220ENST00000608988 KCNS2Q9ULS6 477 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 FUT9Q9Y231 359 aa18.91■□□□□ 0.62
SHANK2-220ENST00000608988 RBM7Q9Y580 266 aaKnown RBP18.91■□□□□ 0.62
SHANK2-220ENST00000608988 CCNOP22674 350 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 PAX5Q02548 391 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 FAM180AQ6UWF9 173 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 FGFRL1Q8N441 504 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 CIB3Q96Q77 187 aaPredicted RBP18.9■□□□□ 0.62
SHANK2-220ENST00000608988 ASCC3Q8N3C0 2202 aaKnown RBP18.9■□□□□ 0.62
SHANK2-220ENST00000608988 C17orf112F2Z3M2 114 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 MLNRO43193 412 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 PDE6DO43924 150 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 TRAPPC6AO75865 159 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 P0C879 139 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 OR8G2PQ6IF36 304 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 MRPL41Q8IXM3 137 aaKnown RBP18.9■□□□□ 0.62
SHANK2-220ENST00000608988 POM121L2Q96KW2 1035 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 DIRC2Q96SL1 478 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 SLC25A22Q9H936 323 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 WIPI2Q9Y4P8 454 aa18.9■□□□□ 0.62
SHANK2-220ENST00000608988 TMPRSS2O15393 492 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 RFPL3SP0C7P2 107 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 PLP2Q04941 152 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 FFAR4Q5NUL3 377 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 DRAM1Q8N682 238 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 TCTEX1D1Q8N7M0 179 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 ZNF709Q8N972 641 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 TMEM37Q8WXS4 190 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 ELOVL1Q9BW60 279 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 MBNL3Q9NUK0 354 aaKnown RBP18.89■□□□□ 0.61
SHANK2-220ENST00000608988 SZT2Q5T011 3432 aa18.89■□□□□ 0.61
SHANK2-220ENST00000608988 ZNF16P17020 682 aaPredicted RBP18.88■□□□□ 0.61
SHANK2-220ENST00000608988 ERVFC1-1P60608 527 aa18.88■□□□□ 0.61
SHANK2-220ENST00000608988 C1orf194Q5T5A4 169 aa18.88■□□□□ 0.61
SHANK2-220ENST00000608988 OR10P1Q8NGE3 313 aa18.88■□□□□ 0.61
SHANK2-220ENST00000608988 UBE2ZQ9H832 354 aaPredicted RBP18.88■□□□□ 0.61
SHANK2-220ENST00000608988 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.88■□□□□ 0.61
SHANK2-220ENST00000608988 SNRPCP09234 159 aaKnown RBP18.88■□□□□ 0.61
SHANK2-220ENST00000608988 OR1K1Q8NGR3 316 aa18.88■□□□□ 0.61
SHANK2-220ENST00000608988 TXNDC17Q9BRA2 123 aa18.88■□□□□ 0.61
SHANK2-220ENST00000608988 PMS2P5A8MQ11 134 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 F6UZH7 168 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 GDF1P27539 372 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 RPL15P61313 204 aaKnown RBP18.87■□□□□ 0.61
SHANK2-220ENST00000608988 PPP1CBP62140 327 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 FOXL1Q12952 345 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 SLC23A3Q6PIS1 610 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 TMEM144Q7Z5S9 345 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 ZNF488Q96MN9 340 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 PRRG4Q9BZD6 226 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 FKBP11Q9NYL4 201 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 TRAPPC2LQ9UL33 140 aa18.87■□□□□ 0.61
SHANK2-220ENST00000608988 KIR2DL5BA0A0G2JN68 375 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 KIR2DL5BA0A0G2JPC4 375 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 LRRC30A6NM36 301 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 M0R143 59 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 KIR2DL5AQ8N109 375 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 ZNF645Q8N7E2 425 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 IFI44Q8TCB0 444 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 PAGE4O60829 102 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 RTP5Q14D33 572 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 RAB1CQ92928 201 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 NPCDR1Q9BY65 106 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 BOKQ9UMX3 212 aaPredicted RBP18.86■□□□□ 0.61
SHANK2-220ENST00000608988 WASF3Q9UPY6 502 aa18.86■□□□□ 0.61
SHANK2-220ENST00000608988 A0A096LPE4 126 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 A0A1W2PPZ6 126 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 WDR1O75083 606 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 IGHV3-9P01782 118 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 OR10J1P30954 320 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 CATR1Q13166 79 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 WDYHV1Q96HA8 205 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 RTL8AQ9BWD3 113 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 KCNIP2Q9NS61 270 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 POLDIP2Q9Y2S7 368 aa18.85■□□□□ 0.61
SHANK2-220ENST00000608988 TMEM210A6NLX4 147 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 C11orf94C9JXX5 98 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 M0QZK8 103 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 RAB29O14966 203 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 NGFP01138 241 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 CCL2P13500 99 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms