RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CT45A5P0DMU8 189 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 CT45A7P0DMV0 189 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 EGR2P11161 476 aaPredicted RBP5.92□□□□□ -1.46
CUX1-219ENST00000606749 BLVRBP30043 206 aaPredicted RBP5.92□□□□□ -1.46
CUX1-219ENST00000606749 GNB1P62873 340 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 ZNF260Q3ZCT1 412 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 HSD17B12Q53GQ0 312 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 RBM48Q5RL73 367 aaKnown RBP5.92□□□□□ -1.46
CUX1-219ENST00000606749 ASPHD1Q5U4P2 390 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 ZNF660Q6AZW8 331 aaPredicted RBP5.92□□□□□ -1.46
CUX1-219ENST00000606749 FAM71F2Q6NXP2 309 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 SVOPQ8N4V2 548 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 FAM89BQ8N5H3 189 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 IFI27L2Q9H2X8 130 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 RIMS4Q9H426 269 aaPredicted RBP5.92□□□□□ -1.46
CUX1-219ENST00000606749 KCNK15Q9H427 330 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 PARP11Q9NR21 331 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 PIPOXQ9P0Z9 390 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 KIAA1456Q9P272 454 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 STEAP1Q9UHE8 339 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 SLC23A1Q9UHI7 598 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 NUBP2Q9Y5Y2 271 aa5.92□□□□□ -1.46
CUX1-219ENST00000606749 TRBV6-6A0A0A6YYG2 114 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 ITGB1BP1O14713 200 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 RRHO14718 337 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 SOCS1O15524 211 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 PROP1O75360 226 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 BPNT1O95861 308 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 ARSBP15848 533 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 MC5RP33032 325 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 CEACAM6P40199 344 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 INSL3P51460 131 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 CRIP2P52943 208 aaPredicted RBP5.91□□□□□ -1.46
CUX1-219ENST00000606749 CX3CL1P78423 397 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 ZNF616Q08AN1 781 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 IRF3Q14653 427 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 MED22Q15528 200 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 RPL39P5Q59GN2 51 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 C19orf54Q5BKX5 351 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 LIPKQ5VXJ0 399 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 FAM131AQ6UXB0 335 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 TMEM91Q6ZNR0 172 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 OR6M1Q8NGM8 313 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 SETD6Q8TBK2 473 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 DCUN1D4Q92564 292 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 TMEM203Q969S6 136 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 ABHD14BQ96IU4 210 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 OR5B12Q96R08 314 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 GFI1Q99684 422 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 RNF5Q99942 180 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 AGMATQ9BSE5 352 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 PARP12Q9H0J9 701 aaKnown RBP5.91□□□□□ -1.46
CUX1-219ENST00000606749 C11orf54Q9H0W9 315 aaPredicted RBP5.91□□□□□ -1.46
CUX1-219ENST00000606749 LPAR5Q9H1C0 372 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 VCXQ9H320 206 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 GHITMQ9H3K2 345 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 FBXL15Q9H469 300 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 CHMP1AQ9HD42 196 aaPredicted RBP5.91□□□□□ -1.46
CUX1-219ENST00000606749 SCN3BQ9NY72 215 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 AK3Q9UIJ7 227 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 ZNF256Q9Y2P7 627 aaPredicted RBP5.91□□□□□ -1.46
CUX1-219ENST00000606749 FBXO7Q9Y3I1 522 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 U3KQK5 164 aa5.91□□□□□ -1.46
CUX1-219ENST00000606749 OR5H14A6NHG9 310 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 FOXI3A8MTJ6 420 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 H0YJW9 148 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 SLC17A2O00624 439 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 SOX15O60248 233 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 GSTP1P09211 210 aaKnown RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 SCTP09683 121 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 ZBTB25P24278 435 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 TMEM50BP56557 158 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 NDPQ00604 133 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 TMEM267Q0VDI3 215 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 TPBGQ13641 420 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 P2RY14Q15391 338 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 LCE2DQ5TA82 110 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 GLDNQ6ZMI3 551 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 MOB1BQ7L9L4 216 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 ZNF429Q86V71 674 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 OR5AN1Q8NGI8 311 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 CASTOR1Q8WTX7 329 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 UFD1Q92890 307 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 DLX4Q92988 240 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 PTX4Q96A99 478 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 ASCL2Q99929 193 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 HDHD3Q9BSH5 251 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 URM1Q9BTM9 101 aaKnown RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 TOLLIPQ9H0E2 274 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 ALX4Q9H161 411 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 DUSP21Q9H596 190 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 Q9N2K0 584 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 TPSG1Q9NRR2 321 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 OR1A1Q9P1Q5 309 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 NKX1-2Q9UD57 310 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 RNF150Q9ULK6 438 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 HSF4Q9ULV5 492 aa5.9□□□□□ -1.46
CUX1-219ENST00000606749 FOXA2Q9Y261 457 aaPredicted RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 AK6Q9Y3D8 172 aaKnown RBP5.9□□□□□ -1.46
CUX1-219ENST00000606749 A0A1W2PN81 502 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms