RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 ARPC4P59998 168 aa12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 IGSF11Q5DX21 431 aa12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 ARSJQ5FYB0 599 aaPredicted RBP12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 FAM71F2Q6NXP2 309 aa12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 CNIH2Q6PI25 160 aa12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 CCBE1Q6UXH8 406 aaPredicted RBP12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 Q6ZSV7 163 aa12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 RBM14Q96PK6 669 aaKnown RBP12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 SLC25A33Q9BSK2 321 aa12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 C11orf54Q9H0W9 315 aaPredicted RBP12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 MRPS7Q9Y2R9 242 aaKnown RBP12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 MMP24Q9Y5R2 645 aa12.85□□□□□ -0.35
PPFIA3-213ENST00000602905 SAA2-SAA4A0A096LPE2 208 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 TRBV6-7A0A0A0MS04 114 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 IGKV1-6A0A0C4DH72 117 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 FAM90A9PA6NNJ1 464 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 H3BMQ9 156 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 M0QZK8 103 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 RGS5O15539 181 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 CHST1O43916 411 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 SSX5O60225 188 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 OR2F2O95006 317 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 IGKV1D-33P01593 117 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 IGKV1-33P01594 117 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 SAA2P0DJI9 122 aaPredicted RBP12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 ELK1P19419 428 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 MDKP21741 143 aaPredicted RBP12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 CD1BP29016 333 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 PRSS3P35030 304 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 GPR12P47775 334 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 RELBQ01201 579 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 HERPUD1Q15011 391 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 BEST4Q8NFU0 473 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 OR2T10Q8NGZ9 312 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 OR2T6Q8NHC8 308 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 CFHR4Q92496 578 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 PRSS22Q9GZN4 317 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 TOLLIPQ9H0E2 274 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 IFI27L2Q9H2X8 130 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 C16orf95Q9H693 158 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 CCDC59Q9P031 241 aaKnown RBP12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 ANXA10Q9UJ72 324 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 CEPT1Q9Y6K0 416 aa12.84□□□□□ -0.35
PPFIA3-213ENST00000602905 IGHV3-72A0A0B4J1Y9 119 aa12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 OR3A3P47888 321 aa12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 HABP2Q14520 560 aaPredicted RBP12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 ZNF833PQ6ZTB9 187 aa12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 HOGA1Q86XE5 327 aa12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 ODF3L1Q8IXM7 274 aa12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 ABHD14BQ96IU4 210 aa12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 MOB4Q9Y3A3 225 aa12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 RNF114Q9Y508 228 aa12.83□□□□□ -0.36
PPFIA3-213ENST00000602905 IGKV1D-8A0A087WSZ0 117 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 PTHLHP12272 177 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 HNF4GQ14541 408 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 C11orf88Q6PI97 169 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 LINC01006Q8NI28 216 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 DYNC2LI1Q8TCX1 351 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 C15orf40Q8WUR7 153 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 PARP12Q9H0J9 701 aaKnown RBP12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 EXTL2Q9UBQ6 330 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 RSL24D1Q9UHA3 163 aaKnown RBP12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 RNF150Q9ULK6 438 aa12.82□□□□□ -0.36
PPFIA3-213ENST00000602905 MEIS3P1A6NDR6 274 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 PEX14O75381 377 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 MOSP00540 346 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 OR8U9P0C7N5 309 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 LSAMPQ13449 338 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 EBI3Q14213 229 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 H1FOOQ8IZA3 346 aaPredicted RBP12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 GVQW1Q8N7I0 195 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 OR8U1Q8NH10 309 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 AGMATQ9BSE5 352 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 MRPL20Q9BYC9 149 aaKnown RBP12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 OR2D2Q9H210 308 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 SCPEP1Q9HB40 452 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 NECAP2Q9NVZ3 263 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 STAB1Q9NY15 2570 aa12.81□□□□□ -0.36
PPFIA3-213ENST00000602905 NCBP2LA6PVI3 153 aaKnown RBP12.8□□□□□ -0.36
PPFIA3-213ENST00000602905 HAX1O00165 279 aa12.8□□□□□ -0.36
PPFIA3-213ENST00000602905 TPPPO94811 219 aa12.8□□□□□ -0.36
PPFIA3-213ENST00000602905 HLA-DQB1P01920 261 aa12.8□□□□□ -0.36
PPFIA3-213ENST00000602905 RPL39P5Q59GN2 51 aa12.8□□□□□ -0.36
PPFIA3-213ENST00000602905 EAF1Q96JC9 268 aaPredicted RBP12.8□□□□□ -0.36
PPFIA3-213ENST00000602905 C6orf62Q9GZU0 229 aaPredicted RBP12.8□□□□□ -0.36
PPFIA3-213ENST00000602905 GAB2Q9UQC2 676 aa12.8□□□□□ -0.36
PPFIA3-213ENST00000602905 OR5H14A6NHG9 310 aa12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 ZNF701M0R085 212 aaPredicted RBP12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 SULT1C2O00338 296 aa12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 FGF16O43320 207 aa12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 SLC22A5O76082 557 aa12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 FCER2P06734 321 aa12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 NFYAP23511 347 aaPredicted RBP12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 MC5RP33032 325 aa12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 LUMP51884 338 aaPredicted RBP12.79□□□□□ -0.36
PPFIA3-213ENST00000602905 CDK10Q15131 360 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms