RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 FBXL15Q9H469 300 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 CHMP1AQ9HD42 196 aaPredicted RBP10.19□□□□□ -0.78
RPS28-204ENST00000602140 ISYNA1Q9NPH2 558 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 PIPOXQ9P0Z9 390 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 A3GALT2U3KPV4 340 aa10.19□□□□□ -0.78
RPS28-204ENST00000602140 STAB2Q8WWQ8 2551 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 C3orf84H3BNL1 204 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 FCN1O00602 326 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 RRHO14718 337 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 RAB29O14966 203 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 SAP30O75446 220 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 CT45A6P0DMU7 189 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 CT45A5P0DMU8 189 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 CT45A7P0DMV0 189 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 CRIP2P52943 208 aaPredicted RBP10.18□□□□□ -0.78
RPS28-204ENST00000602140 CX3CL1P78423 397 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 GABPB1Q06547 395 aaPredicted RBP10.18□□□□□ -0.78
RPS28-204ENST00000602140 PLGLAQ15195 96 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 C19orf54Q5BKX5 351 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 RBM48Q5RL73 367 aaKnown RBP10.18□□□□□ -0.78
RPS28-204ENST00000602140 C1orf100Q5SVJ3 147 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 ZNF660Q6AZW8 331 aaPredicted RBP10.18□□□□□ -0.78
RPS28-204ENST00000602140 FAM71F2Q6NXP2 309 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 GLDNQ6ZMI3 551 aaPredicted RBP10.18□□□□□ -0.78
RPS28-204ENST00000602140 LRRTM1Q86UE6 522 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 SETD6Q8TBK2 473 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 ABHD14BQ96IU4 210 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 NICN1Q9BSH3 213 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 TMED9Q9BVK6 235 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 TOLLIPQ9H0E2 274 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 PARP12Q9H0J9 701 aaKnown RBP10.18□□□□□ -0.78
RPS28-204ENST00000602140 KCNK15Q9H427 330 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 PLCXD1Q9NUJ7 323 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 SLC23A1Q9UHI7 598 aa10.18□□□□□ -0.78
RPS28-204ENST00000602140 FOXA2Q9Y261 457 aaPredicted RBP10.18□□□□□ -0.78
RPS28-204ENST00000602140 HUWE1Q7Z6Z7 4374 aaKnown RBP10.17□□□□□ -0.78
RPS28-204ENST00000602140 IGHV4OR15-8A0A075B7B6 117 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 A0A087WW49 117 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 LINC01619G3V211 115 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 H7C2Y5 167 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 NAPSAO96009 420 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 GSTP1P09211 210 aaKnown RBP10.17□□□□□ -0.78
RPS28-204ENST00000602140 EGR2P11161 476 aaPredicted RBP10.17□□□□□ -0.78
RPS28-204ENST00000602140 SPNP16150 400 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 UNC119Q13432 240 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 ZNF880Q6PDB4 577 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 SBSPONQ8IVN8 264 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 MS4A15Q8N5U1 240 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 KCNG3Q8TAE7 436 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 ABHD5Q8WTS1 349 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 FBLIM1Q8WUP2 373 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 TM2D1Q9BX74 207 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 TPSG1Q9NRR2 321 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 FKBP14Q9NWM8 211 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 NUBP2Q9Y5Y2 271 aa10.17□□□□□ -0.78
RPS28-204ENST00000602140 A0A0A6YYD4 124 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 OR5H14A6NHG9 310 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 H0YJW9 148 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 LGALS1P09382 135 aaKnown RBP10.16□□□□□ -0.78
RPS28-204ENST00000602140 SRMP19623 302 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 MC5RP33032 325 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 TMEM267Q0VDI3 215 aaPredicted RBP10.16□□□□□ -0.78
RPS28-204ENST00000602140 RCN1Q15293 331 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 MOB1BQ7L9L4 216 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 OVCH2Q7RTZ1 564 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 TCTEX1D1Q8N7M0 179 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 PHYHIPQ92561 330 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 ARPC1AQ92747 370 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 CLCC1Q96S66 551 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 FAM103A1Q9BTL3 118 aaKnown RBP10.16□□□□□ -0.78
RPS28-204ENST00000602140 GHITMQ9H3K2 345 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 PLEKHJ1Q9NW61 149 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 GAB2Q9UQC2 676 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 WASHC3Q9Y3C0 194 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 BOLA1Q9Y3E2 137 aa10.16□□□□□ -0.78
RPS28-204ENST00000602140 TMEM14DPA8MWL7 114 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 SLC22A1O15245 554 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 RBBP9O75884 186 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 IGHV3-11P01762 117 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 GP9P14770 177 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 CEACAM6P40199 344 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 QRFPP83859 136 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 HSD17B12Q53GQ0 312 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 ACTBL2Q562R1 376 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 PYHIN1Q6K0P9 492 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 ACSM6Q6P461 480 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 CD200R1LQ6Q8B3 271 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 UNQ5815/PRO19632Q6UWF5 114 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 CEACAM19Q7Z692 300 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 PPP1R27Q86WC6 154 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 DRAXINQ8NBI3 349 aaPredicted RBP10.15□□□□□ -0.78
RPS28-204ENST00000602140 OR5AN1Q8NGI8 311 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 MS4A10Q96PG2 267 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 RCHY1Q96PM5 261 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 AGMATQ9BSE5 352 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 HDHD3Q9BSH5 251 aaPredicted RBP10.15□□□□□ -0.78
RPS28-204ENST00000602140 MND1Q9BWT6 205 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 OR1A1Q9P1Q5 309 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 METTL1Q9UBP6 276 aaKnown RBP10.15□□□□□ -0.78
RPS28-204ENST00000602140 AK3Q9UIJ7 227 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms