RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 TMEM82A0PJX8 343 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 OR5B21A6NL26 309 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ZNF736B4DX44 427 aaPredicted RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 H3BSH0 61 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 TOR1AO14656 332 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 SYNGR1O43759 233 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 MTRF1O75570 445 aaKnown RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 DUS4LO95620 317 aaKnown RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 LY86O95711 162 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 RAB3DO95716 219 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 CST4P01036 141 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 NRASP01111 189 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 OR4E1P0C645 316 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 PET100P0DJ07 73 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ZNF728P0DKX0 622 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 AMY2BP19961 511 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 RAB3AP20336 220 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ZP3P21754 424 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 CD24P25063 80 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ACKR3P25106 362 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 OTX1P32242 354 aaPredicted RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 BRS3P32247 399 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 SOX2P48431 317 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 BLCAPP62952 87 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 HES1Q14469 280 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ZNF273Q14593 569 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 OPCMLQ14982 345 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 CEACAM21Q3KPI0 293 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 RNASE10Q5GAN6 216 aaKnown RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 TOR2AQ5JU69 321 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 AWAT2Q6E213 333 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 SIGIRRQ6IA17 410 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 HCP5Q6MZN7 132 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ACP7Q6ZNF0 438 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 UTS2BQ765I0 119 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 OVCH2Q7RTZ1 564 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 RNF144BQ7Z419 303 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 HSD17B13Q7Z5P4 300 aaPredicted RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 SLC25A42Q86VD7 318 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 TMEM17Q86X19 198 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ZNF573Q86YE8 665 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 STPG2Q8N412 459 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 C12orf45Q8N5I9 185 aaPredicted RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 CD177Q8N6Q3 437 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 OR11H4Q8NGC9 324 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 OR5M8Q8NGP6 311 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 KCNG3Q8TAE7 436 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 OR51E1Q8TCB6 317 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 TNFAIP8L1Q8WVP5 186 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 HPSE2Q8WWQ2 592 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 MALSU1Q96EH3 234 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ZNF714Q96N38 554 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 AMELYQ99218 206 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 PHB2Q99623 299 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 URM1Q9BTM9 101 aaKnown RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 CST11Q9H112 138 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 TLNRD1Q9H1K6 362 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 MEGF9Q9H1U4 602 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ATG5Q9H1Y0 275 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 SERTAD4Q9NUC0 356 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 FAM206AQ9NX38 181 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 RASL12Q9NYN1 266 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 COMMD9Q9P000 198 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 PIPOXQ9P0Z9 390 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ZNF319Q9P2F9 582 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 ZMAT5Q9UDW3 170 aaKnown RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 PFDN2Q9UHV9 154 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 SLC7A11Q9UPY5 501 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 SLC22A13Q9Y226 551 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 TBL2Q9Y4P3 447 aaKnown RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 HECTD4Q9Y4D8 3996 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 HUWE1Q7Z6Z7 4374 aaKnown RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
VRK3-226ENST00000602029 TRAV18A0A075B6X5 111 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 A0A0B4J203 849 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 hADV38S2A0JD32 116 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 A6NDX4 124 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 A6NIN4 97 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 SH2D7A6NKC9 451 aaPredicted RBP4.17□□□□□ -1.74
VRK3-226ENST00000602029 SERPINE3A8MV23 424 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 TMEM14DPA8MWL7 114 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 J3QT63 122 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 SYT7O43581 403 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 IGLV3-1P01715 115 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 TTRP02766 147 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 TK1P04183 234 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 CD3DP04234 171 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 ZNF20P17024 532 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 HTR1DP28221 377 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 CLDN12P56749 244 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 TAS2R46P59540 309 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 EIF5AP63241 154 aaKnown RBP4.17□□□□□ -1.74
VRK3-226ENST00000602029 QRFPP83859 136 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 COL10A1Q03692 680 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 ODF4Q2M2E3 257 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 ZNF260Q3ZCT1 412 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 C4orf46Q504U0 113 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 UQCC3Q6UW78 93 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 GSG1LQ6UXU4 331 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 Q6ZS46 218 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms