RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CASQ2O14958 399 aaPredicted RBP13.19□□□□□ -0.3
SCAF1-204ENST00000601038 ST8SIA5O15466 376 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 GNB1P62873 340 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 QRFPP83859 136 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 UNC119Q13432 240 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 SPHARQ15513 63 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 ZNF660Q6AZW8 331 aaPredicted RBP13.19□□□□□ -0.3
SCAF1-204ENST00000601038 FAM131AQ6UXB0 335 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 MOB1BQ7L9L4 216 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 OR5B12Q96R08 314 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 NICN1Q9BSH3 213 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 GHITMQ9H3K2 345 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 RIMS4Q9H426 269 aaPredicted RBP13.19□□□□□ -0.3
SCAF1-204ENST00000601038 CHMP1AQ9HD42 196 aaPredicted RBP13.19□□□□□ -0.3
SCAF1-204ENST00000601038 PLEKHJ1Q9NW61 149 aa13.19□□□□□ -0.3
SCAF1-204ENST00000601038 TRBV6-6A0A0A6YYG2 114 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 OR5H14A6NHG9 310 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 ITGB1BP1O14713 200 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 RRHO14718 337 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 SLC22A1O15245 554 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 CT45A6P0DMU7 189 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 CT45A5P0DMU8 189 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 CT45A7P0DMV0 189 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 MC5RP33032 325 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 CRIP2P52943 208 aaPredicted RBP13.18□□□□□ -0.3
SCAF1-204ENST00000601038 HSD17B12Q53GQ0 312 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 RPL39P5Q59GN2 51 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 C19orf54Q5BKX5 351 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 CEACAM19Q7Z692 300 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 ZNF429Q86V71 674 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 AGMATQ9BSE5 352 aa13.18□□□□□ -0.3
SCAF1-204ENST00000601038 LSM2Q9Y333 95 aaKnown RBP13.18□□□□□ -0.3
SCAF1-204ENST00000601038 SORL1Q92673 2214 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 PTGES3LE9PB15 166 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 BPNT1O95861 308 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 UCHL1P09936 223 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 CX3CL1P78423 397 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 NDPQ00604 133 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 TCTEX1D1Q8N7M0 179 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 OR6M1Q8NGM8 313 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 SETD6Q8TBK2 473 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 DCUN1D4Q92564 292 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 RNF5Q99942 180 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 VCXQ9H320 206 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 KCNK15Q9H427 330 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 FBXL15Q9H469 300 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 FBXO7Q9Y3I1 522 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 NUBP2Q9Y5Y2 271 aa13.17□□□□□ -0.3
SCAF1-204ENST00000601038 A0A0A6YYD4 124 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 A0A1W2PN81 502 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 H0YJW9 148 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 OVOL1O14753 267 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 SOX15O60248 233 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 RBBP9O75884 186 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 GSTP1P09211 210 aaKnown RBP13.16□□□□□ -0.3
SCAF1-204ENST00000601038 CHRNA7P36544 502 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
SCAF1-204ENST00000601038 PLGLAQ15195 96 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 MED22Q15528 200 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 ECSCRQ19T08 205 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 GLDNQ6ZMI3 551 aaPredicted RBP13.16□□□□□ -0.3
SCAF1-204ENST00000601038 FAM89BQ8N5H3 189 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 OR5AN1Q8NGI8 311 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 ABHD14BQ96IU4 210 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 URM1Q9BTM9 101 aaKnown RBP13.16□□□□□ -0.3
SCAF1-204ENST00000601038 PARP12Q9H0J9 701 aaKnown RBP13.16□□□□□ -0.3
SCAF1-204ENST00000601038 LPAR5Q9H1C0 372 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 MGAT4AQ9UM21 535 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 FOXA2Q9Y261 457 aaPredicted RBP13.16□□□□□ -0.3
SCAF1-204ENST00000601038 WASHC3Q9Y3C0 194 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 SMAD5-AS1Q9Y6J3 95 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 DNAH9Q9NYC9 4486 aa13.16□□□□□ -0.3
SCAF1-204ENST00000601038 H7C2Y5 167 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 FCN1O00602 326 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 SOCS1O15524 211 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 LY86O95711 162 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 EGR2P11161 476 aaPredicted RBP13.15□□□□□ -0.3
SCAF1-204ENST00000601038 ZBTB25P24278 435 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 CEACAM6P40199 344 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 EDARADDQ8WWZ3 215 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
SCAF1-204ENST00000601038 ASCL2Q99929 193 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 TOLLIPQ9H0E2 274 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 C11orf54Q9H0W9 315 aaPredicted RBP13.15□□□□□ -0.3
SCAF1-204ENST00000601038 ALX4Q9H161 411 aaPredicted RBP13.15□□□□□ -0.3
SCAF1-204ENST00000601038 TPSG1Q9NRR2 321 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 SCN3BQ9NY72 215 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 RNF150Q9ULK6 438 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 HSF4Q9ULV5 492 aa13.15□□□□□ -0.3
SCAF1-204ENST00000601038 NBEAL2Q6ZNJ1 2754 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 LINC01619G3V211 115 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 HSPA12AO43301 675 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 LGALS1P09382 135 aaKnown RBP13.14□□□□□ -0.31
SCAF1-204ENST00000601038 ARSBP15848 533 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 IRF3Q14653 427 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 AKIRIN2Q53H80 203 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 LIPKQ5VXJ0 399 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 PYHIN1Q6K0P9 492 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms