RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 OR52M1Q8NGK5 317 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 OR52I2Q8NH67 350 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 OR56B4Q8NH76 319 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 UBALD1Q8TB05 177 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF596Q8TC21 504 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 NEK7Q8TDX7 302 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 WFDC12Q8WWY7 111 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 CABLES2Q9BTV7 478 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 GON7Q9BXV9 100 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 METTL8Q9H825 291 aaKnown RBP7.08□□□□□ -1.28
TRIM28-214ENST00000600840 SIRT7Q9NRC8 400 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 KLK11Q9UBX7 282 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 MTFP1Q9UDX5 166 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 TRAPPC2LQ9UL33 140 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 MRPS7Q9Y2R9 242 aaKnown RBP7.08□□□□□ -1.28
TRIM28-214ENST00000600840 CMYA5Q8N3K9 4069 aa7.08□□□□□ -1.28
TRIM28-214ENST00000600840 TRBV6-7A0A0A0MS04 114 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 GPR137BO60478 399 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 NDUFA7O95182 113 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 DIRAS3O95661 229 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 IGLV1-47P01700 117 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 LPLP06858 475 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 C4BPBP20851 252 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 GLP1RP43220 463 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 CBX5P45973 191 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 IER3P46695 156 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF134P52741 427 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 GNG2P59768 71 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 BPIFB3P59826 476 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 HLA-DRB3P79483 266 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 DGCR2P98153 550 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 ARFRP1Q13795 201 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 CDK10Q15131 360 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 IGSF11Q5DX21 431 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 C6orf183Q5T699 404 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 PRAMEF5Q5TYX0 476 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF660Q6AZW8 331 aaPredicted RBP7.07□□□□□ -1.28
TRIM28-214ENST00000600840 TRAT1Q6PIZ9 186 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 MOB1BQ7L9L4 216 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 LDLRAD3Q86YD5 345 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 C8orf31Q8N9H6 132 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 OR11H6Q8NGC7 330 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 LINC01006Q8NI28 216 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 C17orf50Q8WW18 174 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 FCAMRQ8WWV6 532 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 ASB13Q8WXK3 278 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 MAFIPQ8WZ33 124 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 ARL11Q969Q4 196 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 PHF21AQ96BD5 680 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 HYLS1Q96M11 299 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 CITED1Q99966 193 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 AGMATQ9BSE5 352 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 MMP28Q9H239 520 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 TMEM133Q9H2Q1 129 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 GAL3ST2Q9H3Q3 398 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 RANBP3Q9H6Z4 567 aaPredicted RBP7.07□□□□□ -1.28
TRIM28-214ENST00000600840 MCUBQ9NWR8 336 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 GFOD1Q9NXC2 390 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 IDI2-AS1Q9NZ38 188 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 ONECUT1Q9UBC0 465 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF107Q9UII5 783 aaPredicted RBP7.07□□□□□ -1.28
TRIM28-214ENST00000600840 MGAT4AQ9UM21 535 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 ALG5Q9Y673 324 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 SESN1Q9Y6P5 492 aa7.07□□□□□ -1.28
TRIM28-214ENST00000600840 A0A1W2PPH5 198 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 CLPSL1A2RUU4 121 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 MEIS3P1A6NDR6 274 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 ODF3BA8MYP8 253 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 LY6LH3BQJ8 138 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 FABP7O15540 132 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 YPEL1O60688 119 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 PROP1O75360 226 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 TSPAN15O95858 294 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 TCRBP04435 133 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 PAX6P26367 422 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 UBE2E1P51965 193 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 GNMTQ14749 295 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 Q3ZCU0 254 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 MORN2Q502X0 79 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 CT45A1Q5HYN5 189 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 OR52W1Q6IF63 320 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 Q6ZSV7 163 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 TRAPPC6BQ86SZ2 158 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 TMEM86BQ8N661 226 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 BEST4Q8NFU0 473 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 OR52L2PQ8NGH6 319 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 OR4A4PQ8NGN8 299 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 OR4F5Q8NH21 305 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 CT45A3Q8NHU0 189 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 YPEL2Q96QA6 119 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 ST6GALNAC5Q9BVH7 336 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 PARP12Q9H0J9 701 aaKnown RBP7.06□□□□□ -1.28
TRIM28-214ENST00000600840 MED28Q9H204 178 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 BEX1Q9HBH7 125 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF286AQ9HBT8 521 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 OR1A1Q9P1Q5 309 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 ANXA10Q9UJ72 324 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 PSG11Q9UQ72 335 aa7.06□□□□□ -1.28
TRIM28-214ENST00000600840 POMT1Q9Y6A1 747 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms