RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 LEUTXA8MZ59 168 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 OR8U9P0C7N5 309 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 IGKV1-13P0DP09 117 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 ZNF137PP52743 207 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 VAX1Q5SQQ9 334 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 OR8U1Q8NH10 309 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 MALSU1Q96EH3 234 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 ZNF107Q9UII5 783 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 OR2W1Q9Y3N9 320 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 SVEP1Q4LDE5 3571 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 CSF1P09603 554 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 REG1BP48304 166 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 RAB7AP51149 207 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 KLF9Q13886 244 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 PLA1AQ53H76 456 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 ACTBL2Q562R1 376 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 RNASE10Q5GAN6 216 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 FAAP20Q6NZ36 180 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 STEAP1BQ6NZ63 245 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 SIGLECL1Q8N7X8 197 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 GIMAP1Q8WWP7 306 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 S100ZQ8WXG8 99 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 C5orf30Q96GV9 206 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 ZNF251Q9BRH9 671 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 MEGF9Q9H1U4 602 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 PRDM13Q9H4Q3 707 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 FAM96BQ9Y3D0 163 aa16.16■□□□□ 0.18
SHKBP1-222ENST00000600320 SAA2-SAA4A0A096LPE2 208 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 HSD17B6O14756 317 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 PROP1O75360 226 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 RAB3DO95716 219 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 PPYP01298 95 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 FBP1P09467 338 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 ZNF735P0CB33 412 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 SAA2P0DJI9 122 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 RPL39P5Q59GN2 51 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 DHRS11Q6UWP2 260 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 TOMM40LQ969M1 308 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 RPEQ96AT9 228 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 CREB3L1Q96BA8 519 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 ZNF2Q9BSG1 426 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 TAS2R8Q9NYW2 309 aa16.15■□□□□ 0.18
SHKBP1-222ENST00000600320 NSD1Q96L73 2696 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 A0A1W2PPI3 338 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 TBPP20226 339 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 IL3RAP26951 378 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 CEACAM3P40198 252 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 LSAMPQ13449 338 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 Q6YL49 198 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 ZNF833PQ6ZTB9 187 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 OR4C16Q8NGL9 310 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 ZDHHC16Q969W1 377 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 OR2D2Q9H210 308 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 OCEL1Q9H607 264 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 PIPOXQ9P0Z9 390 aa16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 RBM7Q9Y580 266 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-222ENST00000600320 RAB29O14966 203 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 AKAIN1P0CW23 69 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 IL7P13232 177 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 GPR12P47775 334 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 LUMP51884 338 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 PPP5CP53041 499 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 FXYD4P59646 89 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 ZNF816Q0VGE8 651 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 ZNF846Q147U1 533 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 OR6F1Q8NGZ6 308 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 OR56B4Q8NH76 319 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 RTN4IP1Q8WWV3 396 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 FXYD6Q9H0Q3 95 aa16.13■□□□□ 0.17
SHKBP1-222ENST00000600320 OR5H14A6NHG9 310 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 OOSP1A8MZH6 123 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 GAPDHP04406 335 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 TSPAN5P62079 268 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 SCGB2A2Q13296 93 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 TRIQKQ629K1 86 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 TOMM5Q8N4H5 51 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 MOB3AQ96BX8 217 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 RBMXL1Q96E39 390 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 MRPL20Q9BYC9 149 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 WDR12Q9GZL7 423 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 SDHAF2Q9NX18 166 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 ZNF221Q9UK13 617 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 GAB2Q9UQC2 676 aa16.12■□□□□ 0.17
SHKBP1-222ENST00000600320 IGHV1-3A0A0C4DH29 117 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 IGLV2-14P01704 120 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 AMY2AP04746 511 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 IFNA6P05013 189 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 RAB13P51153 203 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 LINC00205P59089 165 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 HERV-K104P61576 105 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 FBLN7Q53RD9 439 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 AADACL3Q5VUY0 350 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 LHFPL1Q86WI0 220 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 TMEM17Q86X19 198 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 TGIF2LXQ8IUE1 241 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 PIFOQ8TCI5 191 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 FAM216AQ8WUB2 273 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 SECTM1Q8WVN6 248 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 CFHR4Q92496 578 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 SSX3Q99909 188 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms