RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TXNL1O43396 289 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 HBZP02008 142 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 GPR12P47775 334 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 TMEM30BQ3MIR4 351 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 DEFB121Q5J5C9 76 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 C6orf183Q5T699 404 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 TEX38Q6PEX7 206 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 C18orf65Q6ZTR6 163 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 GAPTQ8N292 157 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 Q8N6K4 173 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 MCRIP2Q9BUT9 160 aaKnown RBP14.76□□□□□ -0.05
PNKP-213ENST00000599543 GON7Q9BXV9 100 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 ABCG5Q9H222 651 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 TAF9BQ9HBM6 251 aa14.76□□□□□ -0.05
PNKP-213ENST00000599543 ELF5Q9UKW6 265 aaPredicted RBP14.76□□□□□ -0.05
PNKP-213ENST00000599543 WI2-2373I1.2A0A1W2PRP0 233 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 MOSP00540 346 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 GNB3P16520 340 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 RAB6AP20340 208 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 CD1BP29016 333 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 MYCNOSP40205 109 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 GNMTQ14749 295 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 ZNF695Q8IW36 515 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 Q8N9W7 124 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 OR10R2Q8NGX6 335 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 ST6GALNAC6Q969X2 333 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 RAB3CQ96E17 227 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 KCNK7Q9Y2U2 307 aa14.75□□□□□ -0.05
PNKP-213ENST00000599543 LINC01548A6NM66 108 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 RAB27BO00194 218 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 SLC31A2O15432 143 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 TRAT1Q6PIZ9 186 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 SLC25A48Q6ZT89 311 aaKnown RBP14.74□□□□□ -0.05
PNKP-213ENST00000599543 GPR141Q7Z602 305 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 OR8H1Q8NGG4 311 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 OR52L2PQ8NGH6 319 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 SLC25A38Q96DW6 304 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 RASL11BQ9BPW5 248 aa14.74□□□□□ -0.05
PNKP-213ENST00000599543 CMSS1Q9BQ75 279 aaKnown RBP14.74□□□□□ -0.05
PNKP-213ENST00000599543 MBNL3Q9NUK0 354 aaKnown RBP14.74□□□□□ -0.05
PNKP-213ENST00000599543 CA11O75493 328 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 NAPSAO96009 420 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 ZNF137PP52743 207 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 PNLIPRP3Q17RR3 467 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 CXorf66Q5JRM2 361 aaPredicted RBP14.73□□□□□ -0.05
PNKP-213ENST00000599543 ANKRD13BQ86YJ7 626 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 ZNF439Q8NDP4 499 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 MAFIPQ8WZ33 124 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 S1PR3Q99500 378 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 P2RX4Q99571 388 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 KCNIP1Q9NZI2 227 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 HSF4Q9ULV5 492 aa14.73□□□□□ -0.05
PNKP-213ENST00000599543 METTL21EPA6NDL7 271 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 ZNF736B4DX44 427 aaPredicted RBP14.72□□□□□ -0.05
PNKP-213ENST00000599543 GABARAPO95166 117 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 HIST1H1DP16402 221 aaKnown RBP14.72□□□□□ -0.05
PNKP-213ENST00000599543 RANBP1P43487 201 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 ZNF134P52741 427 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 RAB25P57735 213 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 CTF1Q16619 201 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 VAX1Q5SQQ9 334 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 CLVS1Q8IUQ0 354 aaPredicted RBP14.72□□□□□ -0.05
PNKP-213ENST00000599543 IL1F10Q8WWZ1 152 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 DUX3Q96PT4 197 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 RHBDL2Q9NX52 303 aa14.72□□□□□ -0.05
PNKP-213ENST00000599543 MFNGO00587 321 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 RPLP1P05386 114 aaKnown RBP14.71□□□□□ -0.05
PNKP-213ENST00000599543 CD3GP09693 182 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 SOX6P35712 828 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 PPP1CCP36873 323 aaKnown RBP14.71□□□□□ -0.05
PNKP-213ENST00000599543 FOXE3Q13461 319 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 HMGN3Q15651 99 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 CDNFQ49AH0 187 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 CT45A1Q5HYN5 189 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 STEAP3Q658P3 488 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 FAM71E2Q8N5Q1 922 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 OR8U1Q8NH10 309 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 CT45A3Q8NHU0 189 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 RBMXL1Q96E39 390 aaKnown RBP14.71□□□□□ -0.05
PNKP-213ENST00000599543 RAX2Q96IS3 184 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 C12orf4Q9NQ89 552 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 OR2S2Q9NQN1 319 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 PLSCR3Q9NRY6 295 aa14.71□□□□□ -0.05
PNKP-213ENST00000599543 ZMAT5Q9UDW3 170 aaKnown RBP14.71□□□□□ -0.05
PNKP-213ENST00000599543 ZNF230Q9UIE0 474 aaPredicted RBP14.71□□□□□ -0.05
PNKP-213ENST00000599543 CCL24O00175 119 aa14.7□□□□□ -0.06
PNKP-213ENST00000599543 VDAC1P21796 283 aa14.7□□□□□ -0.06
PNKP-213ENST00000599543 CD69Q07108 199 aa14.7□□□□□ -0.06
PNKP-213ENST00000599543 DCTN2Q13561 401 aaKnown RBP14.7□□□□□ -0.06
PNKP-213ENST00000599543 ZNF880Q6PDB4 577 aa14.7□□□□□ -0.06
PNKP-213ENST00000599543 LCNL1Q6ZST4 164 aa14.7□□□□□ -0.06
PNKP-213ENST00000599543 PTX4Q96A99 478 aa14.7□□□□□ -0.06
PNKP-213ENST00000599543 HSPB9Q9BQS6 159 aa14.7□□□□□ -0.06
PNKP-213ENST00000599543 TMEM235A6NFC5 223 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 LANCL1O43813 399 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 ELANEP08246 267 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 SCTP09683 121 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 F2RL1P55085 397 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 LSAMPQ13449 338 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 ARFRP1Q13795 201 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms