RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 HAND1O96004 215 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 TK1P04183 234 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 PSMB6P28072 239 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 ZNF93P35789 620 aaPredicted RBP9.91□□□□□ -0.82
ZNF548-209ENST00000598895 ECI1P42126 302 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 EDDM3BP56851 147 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 FLI1Q01543 452 aaPredicted RBP9.91□□□□□ -0.82
ZNF548-209ENST00000598895 EDDM3AQ14507 147 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 PDCD1Q15116 288 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 MOGAT2Q3SYC2 334 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 ZNF529Q6P280 563 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 FIP1L1Q6UN15 594 aaKnown RBP9.91□□□□□ -0.82
ZNF548-209ENST00000598895 HOGA1Q86XE5 327 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 PNKDQ8N490 385 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 Q8N7P7 452 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 CLRN3Q8NCR9 226 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 OR52N4Q8NGI2 321 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 C8orf46Q8TAG6 207 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 ARL11Q969Q4 196 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 URM1Q9BTM9 101 aaKnown RBP9.91□□□□□ -0.82
ZNF548-209ENST00000598895 CST11Q9H112 138 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 CHMP1AQ9HD42 196 aaPredicted RBP9.91□□□□□ -0.82
ZNF548-209ENST00000598895 RAB18Q9NP72 206 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 PCDHB16Q9NRJ7 776 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 TNFRSF19Q9NS68 423 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 KPTNQ9Y664 436 aa9.91□□□□□ -0.82
ZNF548-209ENST00000598895 TRBV6-7A0A0A0MS04 114 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 IGHV1-69DA0A0B4J2H0 117 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 TEX13DA0A0J9YY54 714 aaPredicted RBP9.9□□□□□ -0.82
ZNF548-209ENST00000598895 C5orf51A6NDU8 294 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 DBX1A6NMT0 343 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 FAM25EA8MYX2 175 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 FGF16O43320 207 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 IGHV1-69P01742 117 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 CSN2P05814 226 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 VSIG8P0DPA2 414 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 CCL3L1P16619 93 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 VAMP1P23763 118 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 GABRR1P24046 479 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 OR3A4PP47883 348 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 ERVFRD-1P60508 538 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 RPL31P62899 125 aaKnown RBP9.9□□□□□ -0.82
ZNF548-209ENST00000598895 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 TMEM128Q5BJH2 165 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 OR10K2Q6IF99 312 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 EIF5AL1Q6IS14 154 aaKnown RBP9.9□□□□□ -0.82
ZNF548-209ENST00000598895 Q8IYB0 196 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 SVBPQ8N300 66 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 TPRX1Q8N7U7 411 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 OR56B1Q8NGI3 324 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 OR4K15Q8NH41 348 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 RNF141Q8WVD5 230 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 NKX6-2Q9C056 277 aaPredicted RBP9.9□□□□□ -0.82
ZNF548-209ENST00000598895 ZNF230Q9UIE0 474 aaPredicted RBP9.9□□□□□ -0.82
ZNF548-209ENST00000598895 MRPS28Q9Y2Q9 187 aaKnown RBP9.9□□□□□ -0.82
ZNF548-209ENST00000598895 FBN1P35555 2871 aaKnown RBP9.9□□□□□ -0.82
ZNF548-209ENST00000598895 MXRA5Q9NR99 2828 aa9.9□□□□□ -0.82
ZNF548-209ENST00000598895 TRBV23-1A0A0A0MS06 115 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 DNAJC9-AS1A6NH13 148 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 RNASEK-C17orf49H0YIS7 233 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 K7N7A8 449 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 PSPNO60542 156 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 ZNF737O75373 536 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 LYL1P12980 280 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 HRH1P35367 487 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 TAS2R46P59540 309 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 DEFA5Q01523 94 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 UNC119Q13432 240 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 LRRC37A5PQ49AS3 106 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 TMEM200BQ69YZ2 307 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 ELP2Q6IA86 826 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 IL34Q6ZMJ4 242 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 IQCF2Q8IXL9 164 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 KIR3DL3Q8N743 410 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 BPIFCQ8NFQ6 507 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 OR4S1Q8NGB4 309 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 TERB2Q8NHR7 220 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 DCUN1D4Q92564 292 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 ZDHHC16Q969W1 377 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 RAB3CQ96E17 227 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 SEC22AQ96IW7 307 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 JMJD8Q96S16 334 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 ZMAT3Q9HA38 289 aaKnown RBP9.89□□□□□ -0.83
ZNF548-209ENST00000598895 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.89□□□□□ -0.83
ZNF548-209ENST00000598895 MBD2Q9UBB5 411 aa9.89□□□□□ -0.83
ZNF548-209ENST00000598895 A0A0U1RQK1 487 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 DNASE2O00115 360 aaPredicted RBP9.88□□□□□ -0.83
ZNF548-209ENST00000598895 CCSO14618 274 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 SH2D1BO14796 132 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 TAAR5O14804 337 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 CA11O75493 328 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 HTR3BO95264 441 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 SFT2D2O95562 160 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 OR2H2O95918 312 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 ZNF44P15621 663 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 HIST1H1DP16402 221 aaKnown RBP9.88□□□□□ -0.83
ZNF548-209ENST00000598895 AKR1C4P17516 323 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 SURF2Q15527 256 aaPredicted RBP9.88□□□□□ -0.83
ZNF548-209ENST00000598895 SPIN3Q5JUX0 258 aa9.88□□□□□ -0.83
ZNF548-209ENST00000598895 NKAPLQ5M9Q1 402 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms