RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 FBXO7Q9Y3I1 522 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 IGKV1-6A0A0C4DH72 117 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 G3V318 75 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 LDLRAD4O15165 306 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 LANCL1O43813 399 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 PROP1O75360 226 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 MOSP00540 346 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 ZNF182P17025 639 aaPredicted RBP8.34□□□□□ -1.07
VRK3-214ENST00000598553 BLVRBP30043 206 aaPredicted RBP8.34□□□□□ -1.07
VRK3-214ENST00000598553 TMEM50BP56557 158 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 ZNF846Q147U1 533 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 MOGAT2Q3SYC2 334 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 PLAC9Q5JTB6 97 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 ASPHD1Q5U4P2 390 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 UBE2UQ5VVX9 321 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 GLT8D1Q68CQ7 371 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 C11orf87Q6NUJ2 197 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 ZNF833PQ6ZTB9 187 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 ZNF554Q86TJ5 538 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 FOXRED2Q8IWF2 684 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 SETD6Q8TBK2 473 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 UFD1Q92890 307 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 YIPF6Q96EC8 236 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 RCC1LQ96I51 464 aaKnown RBP8.34□□□□□ -1.07
VRK3-214ENST00000598553 ABHD14BQ96IU4 210 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 NAA50Q9GZZ1 169 aaKnown RBP8.34□□□□□ -1.07
VRK3-214ENST00000598553 KLK15Q9H2R5 256 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 ACOT13Q9NPJ3 140 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 JPT1Q9UK76 154 aa8.34□□□□□ -1.07
VRK3-214ENST00000598553 A0A1B0GVG6 124 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 SMIM30A4D0T7 59 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 NUDT19A8MXV4 375 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 SLC17A2O00624 439 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 ATP6V0E1O15342 81 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 YPEL1O60688 119 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 PFDN1O60925 122 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 SCTP09683 121 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 CD3GP09693 182 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 CPEP16870 476 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 PSMB9P28065 219 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 LUMP51884 338 aaPredicted RBP8.33□□□□□ -1.08
VRK3-214ENST00000598553 ACTBP60709 375 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 EGFEM1PQ0D2K5 195 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 MLLT11Q13015 90 aaPredicted RBP8.33□□□□□ -1.08
VRK3-214ENST00000598553 KIAA0141Q14154 515 aaPredicted RBP8.33□□□□□ -1.08
VRK3-214ENST00000598553 MMDQ15546 238 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 TBCEQ15813 527 aaPredicted RBP8.33□□□□□ -1.08
VRK3-214ENST00000598553 CTF1Q16619 201 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 HES5Q5TA89 166 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 STEAP3Q658P3 488 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 NR2C2APQ86WQ0 139 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 COMMD1Q8N668 190 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 OR51D1Q8NGF3 324 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 OR6M1Q8NGM8 313 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 CASTOR1Q8WTX7 329 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 IL1F10Q8WWZ1 152 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 C5orf30Q96GV9 206 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 KCNIP1Q9NZI2 227 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 KCNK7Q9Y2U2 307 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 WSB1Q9Y6I7 421 aa8.33□□□□□ -1.08
VRK3-214ENST00000598553 IGHV7-81A0A0B4J1V7 117 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 TMEM272A0A1B0GTI8 110 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 AP4M1O00189 453 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 SOX15O60248 233 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 BPNT1O95861 308 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 CT45A6P0DMU7 189 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 CT45A5P0DMU8 189 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 CT45A7P0DMV0 189 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 SLC6A1P30531 599 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 VEGFCP49767 419 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 SLC35B1P78383 322 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 HLA-DRB3P79483 266 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 HTD2P86397 168 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 FAM131AQ6UXB0 335 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 Q6ZNX1 250 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 ZNF695Q8IW36 515 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 FAM89BQ8N5H3 189 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 OR8H1Q8NGG4 311 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 KCNG3Q8TAE7 436 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 ARHGAP5-AS1Q96IT6 56 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 KCTD7Q96MP8 289 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 NEDD4LQ96PU5 975 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 MGLLQ99685 303 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 PECRQ9BY49 303 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 GNB4Q9HAV0 340 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 GAB2Q9UQC2 676 aa8.32□□□□□ -1.08
VRK3-214ENST00000598553 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 FCN1O00602 326 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 DUS4LO95620 317 aaKnown RBP8.31□□□□□ -1.08
VRK3-214ENST00000598553 PSMB8P28062 276 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 PPIFP30405 207 aaKnown RBP8.31□□□□□ -1.08
VRK3-214ENST00000598553 SOX6P35712 828 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 SPCS2Q15005 226 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 C2orf76Q3KRA6 126 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 TIMM50Q3ZCQ8 353 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 C19orf54Q5BKX5 351 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 LY6G6FQ5SQ64 297 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 ZNF367Q7RTV3 350 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 RNF152Q8N8N0 203 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms