RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ATP6V1G2O95670 118 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 IGF1P05019 195 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 SCTP09683 121 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
LIG1-212ENST00000596549 SOX6P35712 828 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 NDPQ00604 133 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 DEFB136Q30KP8 78 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 MOGAT2Q3SYC2 334 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 TEX38Q6PEX7 206 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 FAM131AQ6UXB0 335 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 FAM3DQ96BQ1 224 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 RAX2Q96IS3 184 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 ABHD14BQ96IU4 210 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 AGMATQ9BSE5 352 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 Q9N2K0 584 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 C12orf4Q9NQ89 552 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 SLC23A1Q9UHI7 598 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 V9GY05 133 aa10.22□□□□□ -0.77
LIG1-212ENST00000596549 IGHV7-81A0A0B4J1V7 117 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 K7EIL1 84 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 NBR2O15453 112 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
LIG1-212ENST00000596549 DUS4LO95620 317 aaKnown RBP10.21□□□□□ -0.77
LIG1-212ENST00000596549 IGHG4P01861 327 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 HLA-DRB1P01911 266 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 PSMB8P28062 276 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 SLC6A1P30531 599 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 GABARAPL2P60520 117 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 EGFEM1PQ0D2K5 195 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 FOXE3Q13461 319 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 PNLIPRP3Q17RR3 467 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 C2orf76Q3KRA6 126 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 GLDNQ6ZMI3 551 aaPredicted RBP10.21□□□□□ -0.77
LIG1-212ENST00000596549 NR2C2APQ86WQ0 139 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 ZNF695Q8IW36 515 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 MYOZ3Q8TDC0 251 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 KCTD7Q96MP8 289 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 PIPOXQ9P0Z9 390 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 STEAP1Q9UHE8 339 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 BLOC1S6Q9UL45 172 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 KCNK7Q9Y2U2 307 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 FBXO7Q9Y3I1 522 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 LRRC42Q9Y546 428 aa10.21□□□□□ -0.77
LIG1-212ENST00000596549 A0A0B4J203 849 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 H0YJW9 148 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 ITGB1BP1O14713 200 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 DENRO43583 198 aaKnown RBP10.2□□□□□ -0.78
LIG1-212ENST00000596549 PROP1O75360 226 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 ELANEP08246 267 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 CT45A6P0DMU7 189 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 CT45A5P0DMU8 189 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 CT45A7P0DMV0 189 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 SNRPBP14678 240 aaKnown RBP10.2□□□□□ -0.78
LIG1-212ENST00000596549 VDAC1P21796 283 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 PPIFP30405 207 aaKnown RBP10.2□□□□□ -0.78
LIG1-212ENST00000596549 MYCNOSP40205 109 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 C5orf64Q2M2E5 130 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 CXorf66Q5JRM2 361 aaPredicted RBP10.2□□□□□ -0.78
LIG1-212ENST00000596549 NPBQ8NG41 125 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 OR56B1Q8NGI3 324 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 CMSS1Q9BQ75 279 aaKnown RBP10.2□□□□□ -0.78
LIG1-212ENST00000596549 GON7Q9BXV9 100 aa10.2□□□□□ -0.78
LIG1-212ENST00000596549 RIMS4Q9H426 269 aaPredicted RBP10.2□□□□□ -0.78
LIG1-212ENST00000596549 TRAV1-2A0A0B4J238 106 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 TRDV1A0A1B0GX56 115 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 WI2-2373I1.2A0A1W2PRP0 233 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 SMIM30A4D0T7 59 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 OR5H14A6NHG9 310 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 G3V318 75 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 MFNGO00587 321 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 RAB29O14966 203 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 C19orf54Q5BKX5 351 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 C11orf54Q9H0W9 315 aaPredicted RBP10.19□□□□□ -0.78
LIG1-212ENST00000596549 OR51J1Q9H342 316 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 PARP11Q9NR21 331 aa10.19□□□□□ -0.78
LIG1-212ENST00000596549 IFITM5A6NNB3 132 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 CCL24O00175 119 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 RAB27BO00194 218 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 FCGR3AP08637 254 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 CD3GP09693 182 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 ZBTB25P24278 435 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 MYL9P24844 172 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 CEACAM6P40199 344 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 CDX1P47902 265 aaPredicted RBP10.18□□□□□ -0.78
LIG1-212ENST00000596549 LINC00205P59089 165 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 FHL3Q13643 280 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 UBE2UQ5VVX9 321 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 C22orf42Q6IC83 251 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 SPARTQ8N0X7 666 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 OR5AN1Q8NGI8 311 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 C4orf3Q8WVX3 66 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 EDARADDQ8WWZ3 215 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 PTX4Q96A99 478 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 C5orf30Q96GV9 206 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 CABLES2Q9BTV7 478 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 KLK15Q9H2R5 256 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 FBXL15Q9H469 300 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 MGAT4AQ9UM21 535 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 WSB1Q9Y6I7 421 aa10.18□□□□□ -0.78
LIG1-212ENST00000596549 RRHO14718 337 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms