RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 VAMP1P23763 118 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 GLP1RP43220 463 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 KIR2DS4P43632 304 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 GNB2P62879 340 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 MZT1Q08AG7 82 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 KIR2DS1Q14954 304 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 TMEM65Q6PI78 240 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 Q6ZR03 302 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 C11orf53Q8IXP5 236 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 COQ8AQ8NI60 647 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 MRPL30Q8TCC3 161 aaKnown RBP10.49□□□□□ -0.73
SCAF1-202ENST00000595242 ZNF488Q96MN9 340 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 SLC23A1Q9UHI7 598 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 CRYM-AS1A6NIL9 109 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
SCAF1-202ENST00000595242 GPR37O15354 613 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 TIMM8AO60220 97 aaPredicted RBP10.48□□□□□ -0.73
SCAF1-202ENST00000595242 IGHV4-59P01825 116 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 CTXN2P0C2S0 81 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 PGAM2P15259 253 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 CXCL2P19875 107 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 NFYAP23511 347 aaPredicted RBP10.48□□□□□ -0.73
SCAF1-202ENST00000595242 CD200P41217 278 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 GMFBP60983 142 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 TNFAIP6P98066 277 aaPredicted RBP10.48□□□□□ -0.73
SCAF1-202ENST00000595242 MOB1BQ7L9L4 216 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 BATF2Q8N1L9 274 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 GALNT14Q96FL9 552 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 CABLES2Q9BTV7 478 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 DPCDQ9BVM2 203 aaPredicted RBP10.48□□□□□ -0.73
SCAF1-202ENST00000595242 KRTAP17-1Q9BYP8 105 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 WDR13Q9H1Z4 485 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 SEBOXQ9HB31 216 aaPredicted RBP10.48□□□□□ -0.73
SCAF1-202ENST00000595242 MSL2Q9HCI7 577 aa10.48□□□□□ -0.73
SCAF1-202ENST00000595242 CHMP1AQ9HD42 196 aaPredicted RBP10.48□□□□□ -0.73
SCAF1-202ENST00000595242 TRDCB7Z8K6 153 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 NPIPB11E5RHQ5 1161 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 TUSC2O75896 110 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 DIRAS3O95661 229 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 ZNF728P0DKX0 622 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 GLRA1P23415 457 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 LMO1P25800 156 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 IER3P46695 156 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 CYCSP99999 105 aaKnown RBP10.47□□□□□ -0.73
SCAF1-202ENST00000595242 ANKRD55Q3KP44 614 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 SLC38A6Q8IZM9 456 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 CASTOR1Q8WTX7 329 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 RSRP1Q9BUV0 290 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 NMES1Q9C002 83 aa10.47□□□□□ -0.73
SCAF1-202ENST00000595242 L7N2F9 121 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 SLC33A1O00400 549 aaPredicted RBP10.46□□□□□ -0.73
SCAF1-202ENST00000595242 CCSO14618 274 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 CDIPTO14735 213 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 DEGS1O15121 323 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 OR2H2O95918 312 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 PPYP01298 95 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 TNFRSF1AP19438 455 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 PI3P19957 117 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 FCGR2CP31995 323 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 CFHR2P36980 270 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 RND3P61587 244 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 HLA-DRB3P79483 266 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 ZNF345Q14585 488 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 OPCMLQ14982 345 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 HERPUD1Q15011 391 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 TEX261Q6UWH6 196 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 WDR82Q6UXN9 313 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 GSG1LQ6UXU4 331 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 SGPP2Q8IWX5 399 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 FAM185AQ8N0U4 392 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 LRTM2Q8N967 370 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 OR4A4PQ8NGN8 299 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 OR10Z1Q8NGY1 313 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 PCGF1Q9BSM1 259 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 U3KQ87 197 aa10.46□□□□□ -0.73
SCAF1-202ENST00000595242 DYNC2H1Q8NCM8 4307 aaKnown RBP10.45□□□□□ -0.74
SCAF1-202ENST00000595242 TRBV6-7A0A0A0MS04 114 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 SH2D1BO14796 132 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 TSPAN9O75954 239 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 NXPH2O95156 264 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 MPC2O95563 127 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 LYL1P12980 280 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 AADACP22760 399 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 DUSP1P28562 367 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 S100A11P31949 105 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 KCNJ3P48549 501 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 HERV-K104P61576 105 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 PAX5Q02548 391 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 IL15RAQ13261 267 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 IGSF11Q5DX21 431 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 DHRS7BQ6IAN0 325 aaPredicted RBP10.45□□□□□ -0.74
SCAF1-202ENST00000595242 ZNF497Q6ZNH5 498 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 FAM90A1Q86YD7 464 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 CCDC71LQ8N9Z2 235 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 NEK7Q8TDX7 302 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 FAM210AQ96ND0 272 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 PDCD10Q9BUL8 212 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 NAA60Q9H7X0 242 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 TMEM165Q9HC07 324 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 MBNL3Q9NUK0 354 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms