RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FGF12P61328 243 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 MRPS11P82912 194 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 ACSF3Q4G176 576 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 ZNF573Q86YE8 665 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 THNSL2Q86YJ6 484 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 MKXQ8IYA7 352 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 CLDND2Q8NHS1 167 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 ST8SIA3O43173 380 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 SMPD2O60906 423 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 MRPL49Q13405 166 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 LRTM2Q8N967 370 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 EXTL1Q92935 676 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 CABLES2Q9BTV7 478 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 ZNF286AQ9HBT8 521 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 PLSCR2Q9NRY7 297 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 MPC1Q9Y5U8 109 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 KIR2DL5BA0A0G2JN68 375 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 KIR2DL5BA0A0G2JPC4 375 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 IGHV3-64DA0A0J9YX35 117 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 PPP5D1E7EU14 171 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 HSPA12AO43301 675 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 ATP6V0CP27449 155 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 HOXC12P31275 282 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 PPP1CBP62140 327 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 DPPA3Q6W0C5 159 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 ASCL5Q7RTU5 278 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 SAXO1Q8IYX7 474 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 KIR2DL5AQ8N109 375 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 Q8NFD4 153 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 NEK7Q8TDX7 302 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 DTD1Q8TEA8 209 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 TMEM18Q96B42 140 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 PRR14LQ5THK1 2151 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 PIEZO2Q9H5I5 2752 aa14.47□□□□□ -0.09
SHKBP1-205ENST00000594973 ARID1AO14497 2285 aa14.46□□□□□ -0.09
SHKBP1-205ENST00000594973 BSNQ9UPA5 3926 aa14.46□□□□□ -0.09
SHKBP1-205ENST00000594973 K7EM74 188 aa14.46□□□□□ -0.09
SHKBP1-205ENST00000594973 NPSP0C0P6 89 aa14.46□□□□□ -0.09
SHKBP1-205ENST00000594973 GNG3P63215 75 aa14.46□□□□□ -0.09
SHKBP1-205ENST00000594973 HERPUD1Q15011 391 aa14.46□□□□□ -0.09
SHKBP1-205ENST00000594973 C17orf78Q8N4C9 275 aa14.46□□□□□ -0.09
SHKBP1-205ENST00000594973 CBLN4Q9NTU7 201 aa14.46□□□□□ -0.09
SHKBP1-205ENST00000594973 XKRY2A2RUG3 117 aa14.46□□□□□ -0.1
SHKBP1-205ENST00000594973 SOX15O60248 233 aa14.46□□□□□ -0.1
SHKBP1-205ENST00000594973 RHBDL1O75783 438 aa14.46□□□□□ -0.1
SHKBP1-205ENST00000594973 RPL23AP62750 156 aaKnown RBP14.46□□□□□ -0.1
SHKBP1-205ENST00000594973 COL10A1Q03692 680 aa14.46□□□□□ -0.1
SHKBP1-205ENST00000594973 PYGO2Q9BRQ0 406 aa14.46□□□□□ -0.1
SHKBP1-205ENST00000594973 DKK4Q9UBT3 224 aa14.46□□□□□ -0.1
SHKBP1-205ENST00000594973 PITX3O75364 302 aa14.45□□□□□ -0.1
SHKBP1-205ENST00000594973 OR3A1P47881 315 aa14.45□□□□□ -0.1
SHKBP1-205ENST00000594973 EWSR1Q01844 656 aaKnown RBP eCLIP14.45□□□□□ -0.1
SHKBP1-205ENST00000594973 ALKBH6Q3KRA9 238 aa14.45□□□□□ -0.1
SHKBP1-205ENST00000594973 TMEM211Q6ICI0 200 aa14.45□□□□□ -0.1
SHKBP1-205ENST00000594973 TGIF2LYQ8IUE0 185 aa14.45□□□□□ -0.1
SHKBP1-205ENST00000594973 SLC25A40Q8TBP6 338 aa14.45□□□□□ -0.1
SHKBP1-205ENST00000594973 APC2O95996 2303 aa14.45□□□□□ -0.1
SHKBP1-205ENST00000594973 LOC102723971A0A1B0GUV8 181 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 OR5B21A6NL26 309 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 TRDCB7Z8K6 153 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 DIRAS3O95661 229 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 OR4A8P0C604 315 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 TLE4Q04727 773 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 COTL1Q14019 142 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 TMEM187Q14656 261 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 INO80CQ6PI98 192 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 FBXW12Q6X9E4 464 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 GNPNAT1Q96EK6 184 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 BOD1Q96IK1 185 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 ABHD14AQ9BUJ0 271 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 SHANK1Q9Y566 2161 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 TRAV1-1A0A0B4J248 108 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 AHRRA9YTQ3 701 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 HS3ST1O14792 307 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 ZNF728P0DKX0 622 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 PIGPP57054 158 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 GNMTQ14749 295 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A2PQ658T7 463 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 TEX38Q6PEX7 206 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 IGFL3Q6UXB1 125 aa14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 RCL1Q9Y2P8 373 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 INTS1Q8N201 2190 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A10PA6NDY2 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A18PA6NE21 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A16PA6NEW6 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A20PA6NIJ5 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A8PA6NJQ4 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A7PA6NKC0 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A22PA8MWA6 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A12PA8MX19 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A5PA8MXJ8 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A23PA8MXZ1 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A15PP0C7V4 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A13PP0C7W8 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A14PP0C7W9 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM90A24PP0C7X0 464 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 CXorf67Q86X51 503 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 C18orf12Q96KH6 178 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 OR51I2Q9H344 312 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 NAA60Q9H7X0 242 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms