RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CNBD2Q96M20 576 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 DUX3Q96PT4 197 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 HDHD3Q9BSH5 251 aaPredicted RBP18.4■□□□□ 0.54
LSM4-204ENST00000594828 SLC23A1Q9UHI7 598 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 ZNF580Q9UK33 172 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 MGAT4AQ9UM21 535 aa18.4■□□□□ 0.54
LSM4-204ENST00000594828 FOXI3A8MTJ6 420 aaPredicted RBP18.39■□□□□ 0.53
LSM4-204ENST00000594828 K7EIL1 84 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 NBR2O15453 112 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 OR5H8P0DN80 308 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 CNTFRP26992 372 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 TMEM50BP56557 158 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 C2orf76Q3KRA6 126 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 FAM3DQ96BQ1 224 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 KCTD7Q96MP8 289 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 CHCHD6Q9BRQ6 235 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 BLOC1S6Q9UL45 172 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 V9GY05 133 aa18.39■□□□□ 0.53
LSM4-204ENST00000594828 KIR2DS1Q14954 304 aa18.38■□□□□ 0.53
LSM4-204ENST00000594828 NPBQ8NG41 125 aa18.38■□□□□ 0.53
LSM4-204ENST00000594828 OR8U1Q8NH10 309 aa18.38■□□□□ 0.53
LSM4-204ENST00000594828 ARHGAP5-AS1Q96IT6 56 aa18.38■□□□□ 0.53
LSM4-204ENST00000594828 PECRQ9BY49 303 aa18.38■□□□□ 0.53
LSM4-204ENST00000594828 GHITMQ9H3K2 345 aa18.38■□□□□ 0.53
LSM4-204ENST00000594828 ITGB1BP1O14713 200 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 HSPA12AO43301 675 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 HLA-DRB1P01911 266 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 ZBTB25P24278 435 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 CEACAM6P40199 344 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 RAB25P57735 213 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 HLA-DRB3P79483 266 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 TBCEQ15813 527 aaPredicted RBP18.37■□□□□ 0.53
LSM4-204ENST00000594828 C5orf64Q2M2E5 130 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 RPL39P5Q59GN2 51 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 DEFB121Q5J5C9 76 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 LIN54Q6MZP7 749 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 ZNF367Q7RTV3 350 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 OR56B1Q8NGI3 324 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 ABHD14BQ96IU4 210 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 PARP12Q9H0J9 701 aaKnown RBP18.37■□□□□ 0.53
LSM4-204ENST00000594828 OR51J1Q9H342 316 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 Q9N2K0 584 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 C12orf4Q9NQ89 552 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 KIAA1456Q9P272 454 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 WSB1Q9Y6I7 421 aa18.37■□□□□ 0.53
LSM4-204ENST00000594828 WI2-2373I1.2A0A1W2PRP0 233 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 ERICH4A6NGS2 130 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 DENRO43583 198 aaKnown RBP18.36■□□□□ 0.53
LSM4-204ENST00000594828 CT45A6P0DMU7 189 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 CT45A5P0DMU8 189 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 CT45A7P0DMV0 189 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 PSMB8P28062 276 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 DEFB136Q30KP8 78 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 HES5Q5TA89 166 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 FAM131AQ6UXB0 335 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 EDARADDQ8WWZ3 215 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 CMSS1Q9BQ75 279 aaKnown RBP18.36■□□□□ 0.53
LSM4-204ENST00000594828 AGMATQ9BSE5 352 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 C11orf54Q9H0W9 315 aaPredicted RBP18.36■□□□□ 0.53
LSM4-204ENST00000594828 OR1A1Q9P1Q5 309 aa18.36■□□□□ 0.53
LSM4-204ENST00000594828 IGHV7-81A0A0B4J1V7 117 aa18.35■□□□□ 0.53
LSM4-204ENST00000594828 LDLRAD4O15165 306 aa18.35■□□□□ 0.53
LSM4-204ENST00000594828 SCTP09683 121 aa18.35■□□□□ 0.53
LSM4-204ENST00000594828 MC5RP33032 325 aa18.35■□□□□ 0.53
LSM4-204ENST00000594828 SSX1Q16384 188 aa18.35■□□□□ 0.53
LSM4-204ENST00000594828 PARP11Q9NR21 331 aa18.35■□□□□ 0.53
LSM4-204ENST00000594828 RAB22AQ9UL26 194 aa18.35■□□□□ 0.53
LSM4-204ENST00000594828 RAB26Q9ULW5 256 aa18.35■□□□□ 0.53
LSM4-204ENST00000594828 TMEM272A0A1B0GTI8 110 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 OR5H14A6NHG9 310 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 G3V318 75 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 PDCD5O14737 125 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 ATP6V0E1O15342 81 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 NDUFA3O95167 84 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 PPIFP30405 207 aaKnown RBP18.34■□□□□ 0.53
LSM4-204ENST00000594828 PLAC9Q5JTB6 97 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 TMEM65Q6PI78 240 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 GLDNQ6ZMI3 551 aaPredicted RBP18.34■□□□□ 0.53
LSM4-204ENST00000594828 C4orf3Q8WVX3 66 aa18.34■□□□□ 0.53
LSM4-204ENST00000594828 TRAV1-2A0A0B4J238 106 aa18.33■□□□□ 0.52
LSM4-204ENST00000594828 GSTP1P09211 210 aaKnown RBP18.33■□□□□ 0.52
LSM4-204ENST00000594828 PTX4Q96A99 478 aa18.33■□□□□ 0.52
LSM4-204ENST00000594828 ZMAT5Q9UDW3 170 aaKnown RBP18.33■□□□□ 0.52
LSM4-204ENST00000594828 RNF150Q9ULK6 438 aa18.33■□□□□ 0.52
LSM4-204ENST00000594828 TRAV41A0A0B4J266 112 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 TRDCB7Z8K6 153 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 H0YJW9 148 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 H7C2Y5 167 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 MRPS15P82914 257 aaKnown RBP18.32■□□□□ 0.52
LSM4-204ENST00000594828 PLA2G7Q13093 441 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 OR5AN1Q8NGI8 311 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 OR5M8Q8NGP6 311 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 KLK15Q9H2R5 256 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 FBXL15Q9H469 300 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 NDUFB11Q9NX14 153 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 WASHC3Q9Y3C0 194 aa18.32■□□□□ 0.52
LSM4-204ENST00000594828 TRDV1A0A1B0GX56 115 aa18.31■□□□□ 0.52
LSM4-204ENST00000594828 RRHO14718 337 aa18.31■□□□□ 0.52
LSM4-204ENST00000594828 IGLV1-40P01703 118 aa18.31■□□□□ 0.52
LSM4-204ENST00000594828 CD3GP09693 182 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms