RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PRAMEF5Q5TYX0 476 aa12.5□□□□□ -0.41
VRK3-207ENST00000594092 GLYATL2Q8WU03 294 aa12.5□□□□□ -0.41
VRK3-207ENST00000594092 MSI2Q96DH6 328 aaKnown RBP12.5□□□□□ -0.41
VRK3-207ENST00000594092 PSMG3-AS1Q96PY0 264 aa12.5□□□□□ -0.41
VRK3-207ENST00000594092 FBN2P35556 2912 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 FXYD6-FXYD2A0A087WZ82 144 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 HMSDA8MTL9 139 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 TNFSF12O43508 249 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 PDLIM4P50479 330 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 LRRC37A5PQ49AS3 106 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 UTF1Q5T230 341 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 ZNF787Q6DD87 383 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 OR52M1Q8NGK5 317 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 PPP1R1CQ8WVI7 109 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 C2orf50Q96LR7 162 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 GPHA2Q96T91 129 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 TMEM222Q9H0R3 208 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 RPUSD1Q9UJJ7 312 aaKnown RBP12.49□□□□□ -0.41
VRK3-207ENST00000594092 RNF150Q9ULK6 438 aa12.49□□□□□ -0.41
VRK3-207ENST00000594092 TRAV14DV4A0A0A6YYC5 116 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 H0Y980 276 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 B3GALNT1O75752 331 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 NFYBP25208 207 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 ATP5J2P56134 94 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 DLX6P56179 175 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 ERVFRD-1P60508 538 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 TMEM30BQ3MIR4 351 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 HEPN1Q6WQI6 88 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 DRAM1Q8N682 238 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 ZNF645Q8N7E2 425 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 EDARADDQ8WWZ3 215 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 C18orf12Q96KH6 178 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 AGMATQ9BSE5 352 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 BPESC1Q9GZL8 116 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 OR2D2Q9H210 308 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 PSG11Q9UQ72 335 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 YLPM1P49750 1951 aaKnown RBP12.48□□□□□ -0.41
VRK3-207ENST00000594092 ARID1AO14497 2285 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 MPTX1A8MV57 137 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 ST8SIA5O15466 376 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 IGHV3-7P01780 117 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 F2RP25116 425 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 SSTR2P30874 369 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 LGALSLQ3ZCW2 172 aaPredicted RBP12.48□□□□□ -0.41
VRK3-207ENST00000594092 GGNBP1Q5YKI7 109 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 C11orf87Q6NUJ2 197 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 ZBTB34Q8NCN2 500 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 C8orf46Q8TAG6 207 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 LEAP2Q969E1 77 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 C5orf30Q96GV9 206 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 OR10C1Q96KK4 312 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 BARX1Q9HBU1 254 aaPredicted RBP12.48□□□□□ -0.41
VRK3-207ENST00000594092 CELSR2Q9HCU4 2923 aa12.48□□□□□ -0.41
VRK3-207ENST00000594092 ITGB1BP1O14713 200 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 ARPC5O15511 151 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 SLC25A4P12235 298 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 PAX1P15863 534 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 C4BPBP20851 252 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 PSMB6P28072 239 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 ZNF134P52741 427 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 KRTAP10-9P60411 292 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 GNB2P62879 340 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 CENPEQ02224 2701 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 MSMO1Q15800 293 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 IAH1Q2TAA2 248 aaPredicted RBP12.47□□□□□ -0.41
VRK3-207ENST00000594092 TMEM268Q5VZI3 342 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 ZNF695Q8IW36 515 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 FAM216AQ8WUB2 273 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 GON7Q9BXV9 100 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 SLA2Q9H6Q3 261 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 TMED3Q9Y3Q3 217 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 TMEM56-RWDD3S4R434 201 aa12.47□□□□□ -0.41
VRK3-207ENST00000594092 PIGBOS1A0A0B4J2F0 54 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 RNF212BA8MTL3 300 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 C22orf46C9J442 243 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 L7N2F9 121 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 SLC31A2O15432 143 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 IGHV2-5P01817 119 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 UCP1P25874 307 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 IFITM2Q01629 132 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 LYZL2Q7Z4W2 148 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 ZNF439Q8NDP4 499 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 OR51H1Q8NH63 302 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 LHFPL5Q8TAF8 219 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 ABHD14BQ96IU4 210 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 SSBP3Q9BWW4 388 aaPredicted RBP12.46□□□□□ -0.41
VRK3-207ENST00000594092 LIN7CQ9NUP9 197 aaKnown RBP12.46□□□□□ -0.41
VRK3-207ENST00000594092 GSKIPQ9P0R6 139 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 PTPN13Q12923 2485 aa12.46□□□□□ -0.41
VRK3-207ENST00000594092 PPIAL4CA0A0B4J2A2 164 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 DUXBA0A1W2PPF3 345 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 MPC2O95563 127 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 CDS2O95674 445 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 PPIAL4GP0DN37 164 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 ESCO2Q56NI9 601 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 CT45A1Q5HYN5 189 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 C11orf42Q8N5U0 333 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms