RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 SAP30O75446 220 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 NAPSAO96009 420 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
USE1-203ENST00000593597 GNAO1P09471 354 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 GP9P14770 177 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 MYL12AP19105 171 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 HTR2CP28335 458 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 CAPGP40121 348 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 LINC00205P59089 165 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 CX3CL1P78423 397 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 QRFPP83859 136 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 ST3GAL4Q11206 333 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 LIN54Q6MZP7 749 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 TMEM65Q6PI78 240 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 ZNF554Q86TJ5 538 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 ZNF429Q86V71 674 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 ZNF555Q8NEP9 628 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 AGMATQ9BSE5 352 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 HDHD3Q9BSH5 251 aaPredicted RBP8.2□□□□□ -1.1
USE1-203ENST00000593597 CKLFQ9UBR5 152 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 NUBP2Q9Y5Y2 271 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 A3GALT2U3KPV4 340 aa8.2□□□□□ -1.1
USE1-203ENST00000593597 IRGMA1A4Y4 181 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 EFCAB10A6NFE3 127 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 LINC01619G3V211 115 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 RRHO14718 337 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 IGHV3-11P01762 117 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 CD1AP06126 327 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 CELP19835 753 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 RPS27AP62979 156 aaKnown RBP8.19□□□□□ -1.1
USE1-203ENST00000593597 FAM71F2Q6NXP2 309 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 Q8N1Y9 231 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 FBLIM1Q8WUP2 373 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 CYGBQ8WWM9 190 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 ABHD14BQ96IU4 210 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 GFI1Q99684 422 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 UQCC2Q9BRT2 126 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 RAB9BQ9NP90 201 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 FKBP14Q9NWM8 211 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 OR1A1Q9P1Q5 309 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 PSORS1C1Q9UIG5 152 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 FOXA2Q9Y261 457 aaPredicted RBP8.19□□□□□ -1.1
USE1-203ENST00000593597 TNCP24821 2201 aa8.19□□□□□ -1.1
USE1-203ENST00000593597 FOXI3A8MTJ6 420 aaPredicted RBP8.18□□□□□ -1.1
USE1-203ENST00000593597 TMEM14DPA8MWL7 114 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 ARPC1BO15143 372 aaKnown RBP8.18□□□□□ -1.1
USE1-203ENST00000593597 CD37P11049 281 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 WNT4P56705 351 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 DEFA5Q01523 94 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 GABPB1Q06547 395 aaPredicted RBP8.18□□□□□ -1.1
USE1-203ENST00000593597 C1orf100Q5SVJ3 147 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 ZNF660Q6AZW8 331 aaPredicted RBP8.18□□□□□ -1.1
USE1-203ENST00000593597 CD200R1LQ6Q8B3 271 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 NKAIN3Q8N8D7 197 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 OR2AK2Q8NG84 335 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 OR5AN1Q8NGI8 311 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 IL1F10Q8WWZ1 152 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 GALMQ96C23 342 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 RHOVQ96L33 236 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 TM2D3Q9BRN9 247 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 TM2D1Q9BX74 207 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 KCNIP1Q9NZI2 227 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 SLC23A1Q9UHI7 598 aa8.18□□□□□ -1.1
USE1-203ENST00000593597 IGKV1-6A0A0C4DH72 117 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 CA2P00918 260 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 IGKV1-16P04430 117 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 TAS2R43P59537 309 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 PSG5Q15238 335 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 SRSF7Q16629 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
USE1-203ENST00000593597 AHSA2Q719I0 299 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 NANOGP1Q8N7R0 232 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 DRAXINQ8NBI3 349 aaPredicted RBP8.17□□□□□ -1.1
USE1-203ENST00000593597 C5orf30Q96GV9 206 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 MS4A10Q96PG2 267 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 CLCC1Q96S66 551 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 CST11Q9H112 138 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 LPAR5Q9H1C0 372 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 EDA2RQ9HAV5 297 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 C19orf73Q9NVV2 129 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 CNOT2Q9NZN8 540 aaKnown RBP8.17□□□□□ -1.1
USE1-203ENST00000593597 KIAA1456Q9P272 454 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 ADAM30Q9UKF2 790 aa8.17□□□□□ -1.1
USE1-203ENST00000593597 LSM2Q9Y333 95 aaKnown RBP8.17□□□□□ -1.1
USE1-203ENST00000593597 TRBV6-6A0A0A6YYG2 114 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 LCE6AA0A183 80 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 OR5H14A6NHG9 310 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 RAB29O14966 203 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 SLC22A1O15245 554 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 SOCS1O15524 211 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 RBMXL2O75526 392 aaKnown RBP8.16□□□□□ -1.1
USE1-203ENST00000593597 RGS11O94810 467 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 IGLV1-51P01701 117 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 IGHV4-30-4P0DP06 118 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 MRGPRG-AS1Q2M3A8 158 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 ACSM3Q53FZ2 586 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 TTC23Q5W5X9 447 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 ZFAND6Q6FIF0 208 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 UNQ5815/PRO19632Q6UWF5 114 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 IL34Q6ZMJ4 242 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 PPP1R27Q86WC6 154 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms